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Merge pull request #693 from kids-first/update-gf-enums
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✅ update workflow_type and data_tyep enum
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zhangb1 authored Sep 12, 2024
2 parents 20b64b4 + 7733105 commit b0efce4
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29 changes: 29 additions & 0 deletions dataservice/api/genomic_file/schemas.py
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"QC Metrics",
"WGS Metrics",
"WXS Metrics",
"Annotated Germline Copy Number Segments",
"Annotated Tumor Only Mutation",
"Annotated Tumor Only Mutation Index",
"Denoised Germline Copy Ratios",
"Familial Relationships",
"Familial Relationships Report",
"Genotyped Germline Copy Number Intervals",
"Genotyped Germline Copy Number Intervals Index",
"Genotyped Germline Copy Number Segments",
"Genotyped Germline Copy Number Segments Index",
"Germline Copy Number Read Depth Stats",
"HLA Genotyping",
"Masked Tumor Only Mutation",
"Masked Tumor Only Mutation Index",
"Pre-pass Tumor Only Structural Variation",
"Pre-pass Tumor Only Structural Variation Index",
"Raw Germline Copy Number Segments",
"Raw Tumor Only Copy Number Segment",
"Raw Tumor Only Structural Variation",
"Raw Tumor Only Structural Variation Index",
"Raw Variant Call",
"Raw Variant Call Index",
"Tumor Only Assembled Haplotypes",
"Tumor Only Assembled Haplotypes Index",
"Tumor Only Copy Number BAF",
"Tumor Only Copy Number Ratio",
"Tumor Only Copy Number Variation",
"Tumor Only Structural Variation"
}

PAIRED_END_ENUM = {1, 2}
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"RNAseq-Analysis",
"Single-VCF-Genotyping",
"Somatic-Mutation",
"Tumor-Only-Mutation"
}

FILE_VERSION_DESCRIPTOR_ENUM = {
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