environment.yml

name: phosphosite
channels:
  - defaults
  - conda-forge
dependencies:
  - appnope=0.1.2
  - asttokens=2.0.5
  - backcall=0.2.0
  - ca-certificates=2023.01.10
  - certifi=2022.12.7
  - comm=0.1.2
  - debugpy=1.5.1
  - decorator=5.1.1
  - entrypoints=0.4
  - executing=0.8.3
  - ipykernel=6.19.2
  - ipython=8.8.0
  - jedi=0.18.1
  - jupyter_client=7.4.8
  - jupyter_core=5.1.1
  - libcxx=14.0.6
  - libffi=3.4.2
  - libsodium=1.0.18
  - matplotlib-inline=0.1.6
  - ncurses=6.4
  - nest-asyncio=1.5.6
  - openssl=1.1.1s
  - packaging=22.0
  - parso=0.8.3
  - pexpect=4.8.0
  - pickleshare=0.7.5
  - pip=22.3.1
  - platformdirs=2.5.2
  - prompt-toolkit=3.0.36
  - psutil=5.9.0
  - ptyprocess=0.7.0
  - pure_eval=0.2.2
  - python=3.8.16
  - python-dateutil=2.8.2
  - pyzmq=23.2.0
  - readline=8.2
  - setuptools=65.6.3
  - six=1.16.0
  - sqlite=3.40.1
  - stack_data=0.2.0
  - tk=8.6.12
  - tornado=6.2
  - traitlets=5.7.1
  - wcwidth=0.2.5
  - wheel=0.37.1
  - xz=5.2.10
  - zeromq=4.3.4
  - zlib=1.2.13
  - pip:
      - appdirs==1.4.4
      - attrs==22.2.0
      - beautifulsoup4==4.12.2
      - bio==1.5.3
      - biopandas==0.5.0.dev0
      - biopython==1.80
      - bioservices==1.11.2
      - biothings-client==0.2.6
      - cattrs==22.2.0
      - charset-normalizer==3.0.1
      - click==8.1.3
      - colorama==0.4.6
      - colorlog==6.7.0
      - contourpy==1.0.7
      - cycler==0.11.0
      - deepdiff==6.3.0
      - easydev==0.12.1
      - exceptiongroup==1.1.1
      - fastjsonschema==2.16.2
      - fonttools==4.39.3
      - gevent==22.10.2
      - graphein==1.7.0
      - greenlet==2.0.2
      - grequests==0.6.0
      - h5py==3.8.0
      - idna==3.4
      - importlib-metadata==6.0.0
      - importlib-resources==5.10.2
      - jaxtyping==0.2.15
      - joblib==1.2.0
      - jsonschema==4.17.3
      - kiwisolver==1.4.4
      - llvmlite==0.39.1
      - loguru==0.7.0
      - looseversion==1.1.2
      - lxml==4.9.2
      - markdown-it-py==2.2.0
      - matplotlib==3.7.1
      - mdurl==0.1.2
      - mmtf-python==1.1.3
      - msgpack==1.0.5
      - multipledispatch==0.6.0
      - mygene==3.2.2
      - nbformat==5.7.3
      - networkx==3.1
      - numba==0.56.4
      - numpy==1.23.5
      - ordered-set==4.1.0
      - pandas==1.5.3
      - patsy==0.5.3
      - pillow==9.5.0
      - pkgutil-resolve-name==1.3.10
      - plotly==5.13.0
      - plotly-express==0.4.1
      - pydantic==1.10.7
      - pygments==2.15.1
      - pyparsing==3.0.9
      - pyrsistent==0.19.3
      - pytz==2022.7.1
      - pyyaml==5.4.1
      - requests==2.28.2
      - requests-cache==1.0.1
      - rich==13.3.5
      - rich-click==1.6.1
      - scikit-learn==1.2.2
      - scipy==1.10.0
      - seaborn==0.12.2
      - soupsieve==2.4.1
      - statsmodels==0.13.5
      - structuremap==0.0.8
      - suds-community==1.1.2
      - tenacity==8.1.0
      - threadpoolctl==3.1.0
      - tqdm==4.64.1
      - typeguard==3.0.2
      - typing-extensions==4.5.0
      - url-normalize==1.4.3
      - urllib3==1.26.14
      - wget==3.2
      - wrapt==1.15.0
      - xarray==2023.1.0
      - xmltodict==0.13.0
      - zipp==3.12.1
      - zope-event==4.6
      - zope-interface==6.0
prefix: /Users/cameronmcmenamie/opt/anaconda3/envs/phosphosite