forked from MoHelmy/oryza-PG
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathUpdated_Genes.txt
59 lines (59 loc) · 5.88 KB
/
Updated_Genes.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
Name Novel GeneModels Total pep Novel Pep PDB CDB TDB GDB ASP DSP IP Chromosome Desc
LOC_Os01g40340 1 3 9 1 8 1 0 0 0 0 0 1 protein SIT4 phosphatase-associated protein domain containing protein, expressed
LOC_Os01g67860 1 1 32 1 31 1 0 0 0 0 1 1 protein fructose-bisphospate aldolase isozyme, putative, expressed
LOC_Os04g18010 1 3 4 1 3 1 0 0 0 0 0 4 protein cleavage and polyadenylation specificity factor subunit 1, putative, expressed
LOC_Os04g27950 1 1 4 2 2 2 0 0 0 0 0 4 protein expressed protein
LOC_Os04g28090 1 1 11 2 9 2 0 0 0 0 0 4 protein MYB family transcription factor, putative, expressed
LOC_Os04g31620 3 1 4 3 1 3 0 0 0 0 0 4 protein retrotransposon protein, putative, unclassified, expressed
LOC_Os04g42600 1 2 10 1 9 1 0 0 0 0 1 4 protein polyadenylate-binding protein, putative, expressed
LOC_Os04g51090 1 1 13 1 12 0 1 0 0 0 1 4 protein tRNA-splicing endonuclease positive effector-related, putative, expressed
LOC_Os07g01020 1 1 20 1 19 1 0 0 0 0 0 7 protein SOR/SNZ family protein, putative, expressed
LOC_Os07g48960 2 1 16 2 14 0 2 0 1 1 0 7 protein OsLonP3 - Putative Lon protease homologue, expressed
LOC_Os11g26850 4 2 34 4 30 4 0 0 0 0 1 11 protein erythronate-4-phosphate dehydrogenase, putative, expressed
LOC_Os03g63410 1 2 22 1 21 1 0 0 0 0 0 3 protein elongation factor Tu, putative, expressed
LOC_Os02g50799 3 1 18 3 15 3 0 0 0 1 2 2 protein nuclear-pore anchor, putative, expressed
LOC_Os03g28330 1 5 45 1 44 1 0 0 0 1 0 3 protein sucrose synthase, putative, expressed
LOC_Os03g40010 1 1 17 1 16 1 0 0 0 0 1 3 protein DEK C terminal domain containing protein, expressed
LOC_Os03g44484 7 2 19 7 12 0 7 0 0 0 7 3 protein DNA-directed RNA polymerase II subunit RPB2, putative, expressed
LOC_Os03g58050 1 1 12 1 11 1 0 0 0 0 1 3 protein ribosomal protein S13p/S18e, putative, expressed
LOC_Os04g02820 1 3 25 2 23 2 0 0 0 1 0 4 protein elongation factor, putative, expressed
LOC_Os07g31450 1 1 2 1 1 0 1 0 0 0 1 7 protein CHR4/MI-2-LIKE, putative, expressed
LOC_Os04g40874 1 1 4 1 3 1 0 0 0 0 0 4 protein glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed
LOC_Os04g58280 2 2 10 2 8 2 0 0 0 0 0 4 protein stem-specific protein TSJT1, putative, expressed
LOC_Os05g39310 1 1 24 1 23 1 0 0 0 1 0 5 protein thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein
LOC_Os06g08480 1 1 10 1 9 1 0 0 0 0 1 6 protein CHD3-type chromatin-remodeling factor PICKLE, putative, expressed
LOC_Os07g43316 2 2 8 2 6 2 0 0 0 0 0 7 protein SAP domain-containing protein, putative, expressed
LOC_Os09g30418 1 1 63 2 61 2 0 0 0 0 1 9 protein heat shock protein, putative
LOC_Os10g02380 1 1 6 1 5 0 1 0 0 0 1 10 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
LOC_Os10g08550 2 3 46 2 44 2 0 0 0 2 0 10 protein enolase, putative, expressed
LOC_Os10g38489 5 1 8 5 3 0 5 0 0 0 5 10 protein glutathione S-transferase GSTU6, putative, expressed
LOC_Os03g51140 2 1 33 2 31 2 0 0 0 0 0 3 protein HEAT repeat family protein, putative, expressed
LOC_Os07g33240 1 1 9 1 8 1 0 0 0 1 0 7 protein endoribonuclease, putative, expressed
LOC_Os10g36490 1 1 9 1 8 1 0 0 0 0 0 10 protein HEAT repeat family protein, putative, expressed
LOC_Os11g03470 1 4 12 1 11 1 0 0 0 1 0 11 protein bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed
LOC_Os11g14170 1 1 2 1 1 0 1 0 0 0 1 11 protein OsDegp12 - Putative Deg protease homologue, expressed
LOC_Os11g26860 4 1 9 4 5 4 0 0 0 0 0 11 protein serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed
LOC_Os07g31340 1 3 10 1 9 1 0 0 0 0 0 7 protein regulator of nonsense transcripts 1, putative, expressed
LOC_Os06g50300 1 1 31 1 30 1 0 0 0 0 1 6 protein heat shock protein, putative, expressed
LOC_Os09g29404 3 3 7 3 4 3 0 0 0 0 3 9 protein glycogen operon protein glgX, putative, expressed
LOC_Os09g31180 1 2 10 1 9 1 0 0 0 0 0 9 protein ribosomal protein L6, putative, expressed
LOC_Os04g56646 3 1 5 4 1 4 0 0 0 0 0 4 protein MEE34, putative, expressed
LOC_Os04g39420 1 1 3 1 2 1 0 0 0 0 0 4 protein 6-phosphofructokinase 2, putative, expressed
LOC_Os05g43252 3 2 3 3 0 3 0 0 0 0 0 5 protein expressed protein
LOC_Os05g43374 2 2 2 2 0 2 0 0 0 0 0 5 protein pseudouridylate synthase, putative, expressed
LOC_Os05g49880 1 2 12 1 11 1 0 0 0 0 0 5 protein lactate/malate dehydrogenase, putative, expressed
LOC_Os06g16270 1 1 2 2 0 2 0 0 0 0 0 6 protein heat shock factor binding protein 2, putative, expressed
LOC_Os06g30310 1 1 14 1 13 0 1 0 0 0 1 6 protein alpha-glucan water dikinase, chloroplast precursor, putative, expressed
LOC_Os03g01020 2 1 2 2 0 2 0 0 0 0 0 3 protein pectinesterase inhibitor domain containing protein, putative, expressed
LOC_Os03g58430 1 1 8 1 7 1 0 0 1 0 0 3 protein 40S ribosomal protein S15, putative, expressed
LOC_Os04g32020 1 3 22 1 21 1 0 0 0 0 0 4 protein 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed
LOC_Os01g53520 1 2 4 1 3 0 1 0 0 0 1 1 protein reticulon domain containing protein, putative, expressed
LOC_Os02g03440 1 1 3 1 2 1 0 0 0 0 0 2 protein LSM domain containing protein, expressed
LOC_Os02g18850 1 1 5 1 4 1 0 0 0 0 1 2 protein OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed
LOC_Os02g27769 1 1 4 1 3 1 0 0 0 1 0 2 protein 40S ribosomal protein S27, putative, expressed
LOC_Os02g40514 1 2 5 1 4 1 0 0 0 0 0 2 protein h/ACA ribonucleoprotein complex subunit 3, putative, expressed
LOC_Os02g44510 1 3 11 1 10 1 0 0 0 0 0 2 protein UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed
LOC_Os02g52290 3 1 8 3 5 3 0 0 0 0 3 2 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
LOC_Os01g05970 1 1 2 1 1 1 0 0 0 0 1 1 protein OsFBO1 - F-box and other domain containing protein, expressed
LOC_Os01g33204 2 1 2 2 0 2 0 0 0 0 0 1 protein retrotransposon protein, putative, unclassified, expressed
LOC_Os01g50960 1 1 8 1 7 1 0 0 0 0 0 1 protein RNA polymerase II transcriptional coactivator KELP, putative, expressed