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lines changed Original file line number Diff line number Diff line change @@ -19,14 +19,17 @@ Material from courses, training and research activities.
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1 . [ basic statistics] ( introduction_to_animal_breeding/notebooks/stat_base.R )
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2 . matrix algebra recap (super-quick)
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3 . [ general introduction to animal breeding] ( introduction_to_animal_breeding/notebooks/breeding.R )
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- 4 . heritability estimation
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- 5 . pedigree and kinship matrices
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- 6 . mixed models
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- 7 . enter genomics
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- 9 . [ runs of homozygosity (ROH) and genomic inbreeding] ( introduction_to_animal_breeding/notebooks/genomic_inbreeding_roh.Rmd )
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- 10 . multiple trait models and genetic correlations
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- 11 . selection index theory
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+ 4 . [ heritability estimation] ( introduction_to_animal_breeding/notebooks/heritability.Rmd )
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+ 5 . [ pedigree and kinship matrices] ( introduction_to_animal_breeding/notebooks/pedigree.Rmd )
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+ 6 . enter genomics: [ genomic relationship matrices] ( introduction_to_animal_breeding/notebooks/g_matrix.Rmd )
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+ 7 . [ runs of homozygosity (ROH) and genomic inbreeding] ( introduction_to_animal_breeding/notebooks/genomic_inbreeding_roh.Rmd )
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+ 8 . mixed models: [ BLUP and GBLUP] ( introduction_to_animal_breeding/notebooks/BLUP_GBLUP.Rmd )
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+ 9 . multiple trait models and genetic correlations
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+ 10 . selection index theory
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+ 11 . brief introduction to deep learning
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+ 12 . models for image recognition: computer vision for veterinary diagnosis (and for genomic selection)
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### Resources
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- R : [ The Comprehensive R Archive Network] ( https://cran.r-project.org/ ) (CRAN)
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+ - Python: [ The Python Tutorial] ( https://docs.python.org/3/tutorial/ )
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