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Training.cs
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// Licensed to the .NET Foundation under one or more agreements.
// The .NET Foundation licenses this file to you under the MIT license.
// See the LICENSE file in the project root for more information.
using Microsoft.ML.Runtime;
using Microsoft.ML.Runtime.Data;
using Microsoft.ML.Runtime.FactorizationMachine;
using Microsoft.ML.Runtime.FastTree;
using Microsoft.ML.Runtime.Internal.Calibration;
using Microsoft.ML.Runtime.Internal.Internallearn;
using Microsoft.ML.Runtime.KMeans;
using Microsoft.ML.Runtime.Learners;
using Microsoft.ML.Runtime.LightGBM;
using Microsoft.ML.Runtime.RunTests;
using Microsoft.ML.StaticPipe;
using Microsoft.ML.Trainers;
using System;
using System.Linq;
using Xunit;
using Xunit.Abstractions;
namespace Microsoft.ML.StaticPipelineTesting
{
public sealed class Training : BaseTestClassWithConsole
{
public Training(ITestOutputHelper output) : base(output)
{
}
[Fact]
public void SdcaRegression()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.generatedRegressionDataset.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new RegressionContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadFloat(11), features: c.LoadFloat(0, 10)),
separator: ';', hasHeader: true);
LinearRegressionPredictor pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, score: ctx.Trainers.Sdca(r.label, r.features, maxIterations: 2, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 11 input features, so we ought to have 11 weights.
Assert.Equal(11, pred.Weights2.Count);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.score, new PoissonLoss());
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.L1, 0, double.PositiveInfinity);
Assert.InRange(metrics.L2, 0, double.PositiveInfinity);
Assert.InRange(metrics.Rms, 0, double.PositiveInfinity);
Assert.Equal(metrics.Rms * metrics.Rms, metrics.L2, 5);
Assert.InRange(metrics.LossFn, 0, double.PositiveInfinity);
// Just output some data on the schema for fun.
var schema = data.AsDynamic.Schema;
for (int c = 0; c < schema.ColumnCount; ++c)
Console.WriteLine($"{schema.GetColumnName(c)}, {schema.GetColumnType(c)}");
}
[Fact]
public void SdcaRegressionNameCollision()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.generatedRegressionDataset.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new RegressionContext(env);
// Here we introduce another column called "Score" to collide with the name of the default output. Heh heh heh...
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadFloat(11), features: c.LoadFloat(0, 10), Score: c.LoadText(2)),
separator: ';', hasHeader: true);
var est = reader.MakeNewEstimator()
.Append(r => (r.label, r.Score, score: ctx.Trainers.Sdca(r.label, r.features, maxIterations: 2)));
var pipe = reader.Append(est);
var model = pipe.Fit(dataSource);
var data = model.Read(dataSource);
// Now, let's see if that column is still there, and still text!
var schema = data.AsDynamic.Schema;
Assert.True(schema.TryGetColumnIndex("Score", out int scoreCol), "Score column not present!");
Assert.Equal(TextType.Instance, schema.GetColumnType(scoreCol));
for (int c = 0; c < schema.ColumnCount; ++c)
Console.WriteLine($"{schema.GetColumnName(c)}, {schema.GetColumnType(c)}");
}
[Fact]
public void SdcaBinaryClassification()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features: c.LoadFloat(1, 9)));
LinearBinaryPredictor pred = null;
ParameterMixingCalibratedPredictor cali = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.Sdca(r.label, r.features,
maxIterations: 2,
onFit: (p, c) => { pred = p; cali = c; })));
var pipe = reader.Append(est);
Assert.Null(pred);
Assert.Null(cali);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
Assert.NotNull(cali);
// 9 input features, so we ought to have 9 weights.
Assert.Equal(9, pred.Weights2.Count);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
Assert.InRange(metrics.LogLoss, 0, double.PositiveInfinity);
Assert.InRange(metrics.Entropy, 0, double.PositiveInfinity);
// Just output some data on the schema for fun.
var schema = data.AsDynamic.Schema;
for (int c = 0; c < schema.ColumnCount; ++c)
Console.WriteLine($"{schema.GetColumnName(c)}, {schema.GetColumnType(c)}");
}
[Fact]
public void SdcaBinaryClassificationNoCalibration()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features: c.LoadFloat(1, 9)));
LinearBinaryPredictor pred = null;
var loss = new HingeLoss(new HingeLoss.Arguments() { Margin = 1 });
// With a custom loss function we no longer get calibrated predictions.
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.Sdca(r.label, r.features,
maxIterations: 2,
loss: loss, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 9 input features, so we ought to have 9 weights.
Assert.Equal(9, pred.Weights2.Count);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
// Just output some data on the schema for fun.
var schema = data.AsDynamic.Schema;
for (int c = 0; c < schema.ColumnCount; ++c)
Console.WriteLine($"{schema.GetColumnName(c)}, {schema.GetColumnType(c)}");
}
[Fact]
public void AveragePerceptronNoCalibration()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features: c.LoadFloat(1, 9)));
LinearBinaryPredictor pred = null;
var loss = new HingeLoss(new HingeLoss.Arguments() { Margin = 1 });
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.AveragedPerceptron(r.label, r.features, lossFunction: loss,
numIterations: 2, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 9 input features, so we ought to have 9 weights.
Assert.Equal(9, pred.Weights2.Count);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
}
[Fact]
public void FfmBinaryClassification()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features1: c.LoadFloat(1, 4), features2: c.LoadFloat(5, 9)));
FieldAwareFactorizationMachinePredictor pred = null;
// With a custom loss function we no longer get calibrated predictions.
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.FieldAwareFactorizationMachine(r.label, new[] { r.features1, r.features2 }, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
}
[Fact]
public void SdcaMulticlass()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.iris.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new MulticlassClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadText(0), features: c.LoadFloat(1, 4)));
MulticlassLogisticRegressionPredictor pred = null;
var loss = new HingeLoss(new HingeLoss.Arguments() { Margin = 1 });
// With a custom loss function we no longer get calibrated predictions.
var est = reader.MakeNewEstimator()
.Append(r => (label: r.label.ToKey(), r.features))
.Append(r => (r.label, preds: ctx.Trainers.Sdca(
r.label,
r.features,
maxIterations: 2,
loss: loss, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
VBuffer<float>[] weights = default;
pred.GetWeights(ref weights, out int n);
Assert.True(n == 3 && n == weights.Length);
foreach (var w in weights)
Assert.True(w.Length == 4);
var biases = pred.GetBiases();
Assert.True(biases.Count() == 3);
var data = model.Read(dataSource);
// Just output some data on the schema for fun.
var schema = data.AsDynamic.Schema;
for (int c = 0; c < schema.ColumnCount; ++c)
Console.WriteLine($"{schema.GetColumnName(c)}, {schema.GetColumnType(c)}");
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds, 2);
Assert.True(metrics.LogLoss > 0);
Assert.True(metrics.TopKAccuracy > 0);
}
[Fact]
public void CrossValidate()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.iris.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new MulticlassClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadText(0), features: c.LoadFloat(1, 4)));
var est = reader.MakeNewEstimator()
.Append(r => (label: r.label.ToKey(), r.features))
.Append(r => (r.label, preds: ctx.Trainers.Sdca(
r.label,
r.features,
maxIterations: 2)));
var results = ctx.CrossValidate(reader.Read(dataSource), est, r => r.label)
.Select(x => x.metrics).ToArray();
Assert.Equal(5, results.Length);
Assert.True(results.All(x => x.LogLoss > 0));
}
[Fact]
public void FastTreeBinaryClassification()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features: c.LoadFloat(1, 9)));
IPredictorWithFeatureWeights<float> pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.FastTree(r.label, r.features,
numTrees: 10,
numLeaves: 5,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 9 input features, so we ought to have 9 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(9, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
}
[Fact]
public void FastTreeRegression()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.generatedRegressionDataset.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new RegressionContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadFloat(11), features: c.LoadFloat(0, 10)),
separator: ';', hasHeader: true);
FastTreeRegressionPredictor pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, score: ctx.Trainers.FastTree(r.label, r.features,
numTrees: 10,
numLeaves: 5,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 11 input features, so we ought to have 11 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(11, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.score, new PoissonLoss());
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.L1, 0, double.PositiveInfinity);
Assert.InRange(metrics.L2, 0, double.PositiveInfinity);
Assert.InRange(metrics.Rms, 0, double.PositiveInfinity);
Assert.Equal(metrics.Rms * metrics.Rms, metrics.L2, 5);
Assert.InRange(metrics.LossFn, 0, double.PositiveInfinity);
}
[ConditionalFact(typeof(Environment), nameof(Environment.Is64BitProcess))] // LightGBM is 64-bit only
public void LightGbmBinaryClassification()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features: c.LoadFloat(1, 9)));
IPredictorWithFeatureWeights<float> pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.LightGbm(r.label, r.features,
numBoostRound: 10,
numLeaves: 5,
learningRate: 0.01,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 9 input features, so we ought to have 9 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(9, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
}
[ConditionalFact(typeof(Environment), nameof(Environment.Is64BitProcess))] // LightGBM is 64-bit only
public void LightGbmRegression()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.generatedRegressionDataset.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new RegressionContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadFloat(11), features: c.LoadFloat(0, 10)),
separator: ';', hasHeader: true);
LightGbmRegressionPredictor pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, score: ctx.Trainers.LightGbm(r.label, r.features,
numBoostRound: 10,
numLeaves: 5,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 11 input features, so we ought to have 11 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(11, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.score, new PoissonLoss());
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.L1, 0, double.PositiveInfinity);
Assert.InRange(metrics.L2, 0, double.PositiveInfinity);
Assert.InRange(metrics.Rms, 0, double.PositiveInfinity);
Assert.Equal(metrics.Rms * metrics.Rms, metrics.L2, 5);
Assert.InRange(metrics.LossFn, 0, double.PositiveInfinity);
}
[Fact]
public void PoissonRegression()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.generatedRegressionDataset.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new RegressionContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadFloat(11), features: c.LoadFloat(0, 10)),
separator: ';', hasHeader: true);
PoissonRegressionPredictor pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, score: ctx.Trainers.PoissonRegression(r.label, r.features,
l1Weight: 2,
enoforceNoNegativity: true,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 11 input features, so we ought to have 11 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(11, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.score, new PoissonLoss());
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.L1, 0, double.PositiveInfinity);
Assert.InRange(metrics.L2, 0, double.PositiveInfinity);
Assert.InRange(metrics.Rms, 0, double.PositiveInfinity);
Assert.Equal(metrics.Rms * metrics.Rms, metrics.L2, 5);
Assert.InRange(metrics.LossFn, 0, double.PositiveInfinity);
}
[Fact]
public void LogisticRegressionBinaryClassification()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features: c.LoadFloat(1, 9)));
IPredictorWithFeatureWeights<float> pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.LogisticRegressionBinaryClassifier(r.label, r.features,
l1Weight: 10,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 9 input features, so we ought to have 9 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(9, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
}
[Fact]
public void MulticlassLogisticRegression()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.iris.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new MulticlassClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadText(0), features: c.LoadFloat(1, 4)));
MulticlassLogisticRegressionPredictor pred = null;
// With a custom loss function we no longer get calibrated predictions.
var est = reader.MakeNewEstimator()
.Append(r => (label: r.label.ToKey(), r.features))
.Append(r => (r.label, preds: ctx.Trainers.MultiClassLogisticRegression(
r.label,
r.features, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
VBuffer<float>[] weights = default;
pred.GetWeights(ref weights, out int n);
Assert.True(n == 3 && n == weights.Length);
foreach (var w in weights)
Assert.True(w.Length == 4);
var data = model.Read(dataSource);
// Just output some data on the schema for fun.
var schema = data.AsDynamic.Schema;
for (int c = 0; c < schema.ColumnCount; ++c)
Console.WriteLine($"{schema.GetColumnName(c)}, {schema.GetColumnType(c)}");
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds, 2);
Assert.True(metrics.LogLoss > 0);
Assert.True(metrics.TopKAccuracy > 0);
}
[Fact]
public void OnlineGradientDescent()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.generatedRegressionDataset.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new RegressionContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadFloat(11), features: c.LoadFloat(0, 10)),
separator: ';', hasHeader: true);
LinearRegressionPredictor pred = null;
var loss = new SquaredLoss();
var est = reader.MakeNewEstimator()
.Append(r => (r.label, score: ctx.Trainers.OnlineGradientDescent(r.label, r.features,
lossFunction:loss,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 11 input features, so we ought to have 11 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(11, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.score, new PoissonLoss());
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.L1, 0, double.PositiveInfinity);
Assert.InRange(metrics.L2, 0, double.PositiveInfinity);
Assert.InRange(metrics.Rms, 0, double.PositiveInfinity);
Assert.Equal(metrics.Rms * metrics.Rms, metrics.L2, 5);
Assert.InRange(metrics.LossFn, 0, double.PositiveInfinity);
}
[Fact]
public void KMeans()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.iris.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new ClusteringContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadText(0), features: c.LoadFloat(1, 4)));
KMeansPredictor pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (label: r.label.ToKey(), r.features))
.Append(r => (r.label, r.features, preds: ctx.Trainers.KMeans(r.features, clustersCount: 3, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
VBuffer<float>[] centroids = default;
int k;
pred.GetClusterCentroids(ref centroids, out k);
Assert.True(k == 3);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.preds.score, r => r.label, r => r.features);
Assert.NotNull(metrics);
Assert.InRange(metrics.AvgMinScore, 0.5262, 0.5264);
Assert.InRange(metrics.Nmi, 0.73, 0.77);
Assert.InRange(metrics.Dbi, 0.662, 0.667);
metrics = ctx.Evaluate(data, r => r.preds.score, label: r => r.label);
Assert.NotNull(metrics);
Assert.InRange(metrics.AvgMinScore, 0.5262, 0.5264);
Assert.True(metrics.Dbi == 0.0);
metrics = ctx.Evaluate(data, r => r.preds.score, features: r => r.features);
Assert.True(double.IsNaN(metrics.Nmi));
metrics = ctx.Evaluate(data, r => r.preds.score);
Assert.NotNull(metrics);
Assert.InRange(metrics.AvgMinScore, 0.5262, 0.5264);
Assert.True(double.IsNaN(metrics.Nmi));
Assert.True(metrics.Dbi == 0.0);
}
[Fact]
public void FastTreeRanking()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.adultRanking.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new RankingContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadFloat(0), features: c.LoadFloat(9, 14), groupId: c.LoadText(1)),
separator: '\t', hasHeader: true);
FastTreeRankingPredictor pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, r.features, groupId: r.groupId.ToKey()))
.Append(r => (r.label, r.groupId, score: ctx.Trainers.FastTree(r.label, r.features, r.groupId, onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.groupId, r => r.score);
Assert.NotNull(metrics);
Assert.True(metrics.Ndcg.Length == metrics.Dcg.Length && metrics.Dcg.Length == 3);
Assert.InRange(metrics.Dcg[0], 1.4, 1.6);
Assert.InRange(metrics.Dcg[1], 1.4, 1.8);
Assert.InRange(metrics.Dcg[2], 1.4, 1.8);
Assert.InRange(metrics.Ndcg[0], 36.5, 37);
Assert.InRange(metrics.Ndcg[1], 36.5, 37);
Assert.InRange(metrics.Ndcg[2], 36.5, 37);
}
[Fact]
public void MultiClassNaiveBayesTrainer()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.iris.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new MulticlassClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadText(0), features: c.LoadFloat(1, 4)));
MultiClassNaiveBayesPredictor pred = null;
// With a custom loss function we no longer get calibrated predictions.
var est = reader.MakeNewEstimator()
.Append(r => (label: r.label.ToKey(), r.features))
.Append(r => (r.label, preds: ctx.Trainers.MultiClassNaiveBayesTrainer(
r.label,
r.features, onFit: p => pred = p)));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
int[] labelHistogram = default;
int[][] featureHistogram = default;
pred.GetLabelHistogram(ref labelHistogram, out int labelCount1);
pred.GetFeatureHistogram(ref featureHistogram, out int labelCount2, out int featureCount);
Assert.True(labelCount1 == 3 && labelCount1 == labelCount2 && labelCount1 <= labelHistogram.Length);
for (int i = 0; i < labelCount1; i++)
Assert.True(featureCount == 4 && (featureCount <= featureHistogram[i].Length));
var data = model.Read(dataSource);
// Just output some data on the schema for fun.
var schema = data.AsDynamic.Schema;
for (int c = 0; c < schema.ColumnCount; ++c)
Console.WriteLine($"{schema.GetColumnName(c)}, {schema.GetColumnType(c)}");
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds, 2);
Assert.True(metrics.LogLoss > 0);
Assert.True(metrics.TopKAccuracy > 0);
}
[Fact]
public void HogwildSGDBinaryClassification()
{
var env = new ConsoleEnvironment(seed: 0);
var dataPath = GetDataPath(TestDatasets.breastCancer.trainFilename);
var dataSource = new MultiFileSource(dataPath);
var ctx = new BinaryClassificationContext(env);
var reader = TextLoader.CreateReader(env,
c => (label: c.LoadBool(0), features: c.LoadFloat(1, 9)));
IPredictorWithFeatureWeights<float> pred = null;
var est = reader.MakeNewEstimator()
.Append(r => (r.label, preds: ctx.Trainers.StochasticGradientDescentClassificationTrainer(r.label, r.features,
l2Weight: 0,
onFit: (p) => { pred = p; })));
var pipe = reader.Append(est);
Assert.Null(pred);
var model = pipe.Fit(dataSource);
Assert.NotNull(pred);
// 9 input features, so we ought to have 9 weights.
VBuffer<float> weights = new VBuffer<float>();
pred.GetFeatureWeights(ref weights);
Assert.Equal(9, weights.Length);
var data = model.Read(dataSource);
var metrics = ctx.Evaluate(data, r => r.label, r => r.preds);
// Run a sanity check against a few of the metrics.
Assert.InRange(metrics.Accuracy, 0, 1);
Assert.InRange(metrics.Auc, 0, 1);
Assert.InRange(metrics.Auprc, 0, 1);
}
}
}