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.zenodo.json

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],
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"license": "GPL-3.0+",
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"access_right": "open",
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"version": "0.2.1.9000-22",
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"publication_date": "2022-01-26"
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"version": "0.2.1",
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"publication_date": "2022-02-20"
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}

BayLum.BuildResults/BayLum_0.2.1.9000-22-Functions.csv BayLum.BuildResults/BayLum_0.2.1-Functions.csv

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BayLum.BuildResults/BayLum_0.2.1.9000-22-Functions.html BayLum.BuildResults/BayLum_0.2.1-Functions.html

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BayLum.BuildResults/BayLum_0.2.1.9000-22-Functions.tex BayLum.BuildResults/BayLum_0.2.1-Functions.tex

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BayLum.BuildResults/BayLum_0.2.1.9000-22-Functions_Markdown.md BayLum.BuildResults/BayLum_0.2.1-Functions_Markdown.md

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BayLum.BuildResults/BayLum_0.2.1.9000-22-bibliography.bib BayLum.BuildResults/BayLum_0.2.1-bibliography.bib

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Luminescence and Radiocarbon Age Dating},
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author = {Claire Christophe and Anne Philippe and Sebastian Kreutzer and Guillaume Guerin},
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year = {2022},
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note = {R package version 0.2.1.9000-22},
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note = {R package version 0.2.1},
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url = {https://CRAN.r-project.org/package=BayLum},
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}
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BayLum.BuildResults/BayLum_0.2.1.9000-22-fun_bibliography.bib BayLum.BuildResults/BayLum_0.2.1-fun_bibliography.bib

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title = {Age_Computation(): Bayesian analysis for the OSL age estimation of one sample},
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volume = {version: },
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author = {Christophe C and Kreutzer S and Philippe A},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {Age_OSLC14(): Bayesian analysis for age estimation of OSL measurements and C-14 ages of various samples},
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volume = {version: },
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author = {Christophe C and Philippe A and Guerin G and Kreutzer S and Baumgarten FH},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {AgeC14_Computation(): Bayesian analysis for C-14 age estimations of various samples},
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volume = {version: },
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author = {Christophe C and Philippe A and Kreutzer S},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {AgeS_Computation(): Bayesian analysis for OSL age estimation of various samples},
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volume = {version: },
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author = {Christophe C and Philippe A and Kreutzer S},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {combine_DataFiles(): Old function Concat_DataFile()},
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volume = {version: 0.1.1},
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author = {Kreutzer S and Christophe C},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {create_FolderTemplates(): Create Folder Templates},
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volume = {version: 0.1.0},
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author = {Kreutzer S},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {create_ThetaMatrix(): Create Theta Matrix},
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volume = {version: 0.1.0},
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author = {Kreutzer S},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {Generate_DataFile_MG(): Generates, from one (or several) BIN file(s) of Multi-grain OSL measurements, a list of luminescence data and information before statistical analysis},
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volume = {version: },
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author = {Christophe C and Kreutzer S and Philippe A},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {Generate_DataFile(): Generates, from one (or several) BIN-file(s) of Single-grain OSL measurements, a list of luminescence data and information before statistical analysis},
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volume = {version: },
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author = {Christophe C and Kreutzer S and Philippe A and Guerin G},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {LT_RegenDose(): Plots Lx/Tx as a function of the regenerative dose},
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volume = {version: },
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author = {Christophe C and Kreutzer S and Philippe A},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {Palaeodose_Computation(): Bayesian analysis for the palaeodose estimation of various samples},
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volume = {version: },
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author = {Christophe C and Kreutzer S and Philippe A},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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year = {2022},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {plot_Ages(): Create Age Plot},
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volume = {version: 0.1.4},
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author = {Kreutzer S and Christophe C},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {plot_MCMC(): Plot MCMC trajectories and posterior distributions},
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volume = {version: 0.1.4},
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author = {Kreutzer S and Christophe C},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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publisher = {BayLum},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {plot_Scatterplots(): Display Scatter Plot Matrix of the Bayesian Age Results},
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volume = {version: 0.3.1},
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author = {Kreutzer S and Christophe C and Philippe A},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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url = {https://CRAN.r-project.org/package=BayLum},
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title = {SC_Ordered(): Create stratigraphically ordered sample matrix},
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author = {Christophe C and Philippe A and Kreutzer S},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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title = {SCMatrix(): Definition of the stratigraphic constraint matrix},
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volume = {version: },
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.9000-22.},
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booktitle = {Christophe, C., Philippe, A., Kreutzer, S., Guerin, G., 2022. BayLum: Chronological Bayesian Models Integrating Optically Stimulated. R package version 0.2.1.},
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Makefile

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RSCRIPT = "$(R_HOME)/bin/Rscript"
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all:
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${RSCRIPT} -e "RLumBuild::build_package(exclude = c('module_check_ReverseDependencies', 'module_add_RLumTeam','module_write_codemetar'), as_cran = FALSE, write_Rbuildignore = TRUE)";
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${RSCRIPT} -e "RLumBuild::build_package(exclude = c('module_check_ReverseDependencies', 'module_add_RLumTeam'), as_cran = TRUE, write_Rbuildignore = TRUE)";

NEWS.md

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<!-- NEWS.md was auto-generated by NEWS.Rmd. Please DO NOT edit by hand!-->
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## BayLum 0.2.1.9000-22 (2022-01-26)
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## BayLum 0.2.1 (2022-02-20)
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*Note: This package version needs at least R \>= 4.0.*
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- Add support for `"rjparallel"` via new argument
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`jags_method = "rjparallel"`, like in `AgeS_Computation()` (thanks
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@IMHarly, #20).
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@IMHarly, \#20).
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#### `Generate_DataFile_MG()`
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