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ThermoRaw and MS-GF+ Not Working #378

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jmattin2 opened this issue Nov 22, 2024 · 1 comment
Open

ThermoRaw and MS-GF+ Not Working #378

jmattin2 opened this issue Nov 22, 2024 · 1 comment
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@hbarsnes
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@jmattin2
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I'm encountering issues trying to use both .raw and .mzML files as my spectrum files. I've included the logs for both. I apologize, I'm very new to proteomics and the analysis softwares. Please help me ASAP!
rawError.txt
mzMLerror.txt
@hbarsnes hbarsnes self-assigned this Nov 27, 2024
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Your mzML files do not seem to contain any valid spectra. I'm therefore guessing that there is something wrong with either the raw files or the conversion of the raw files into mzML. Are you sure that the raw files are ok and contain the wanted spectra?

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@hbarsnes @jmattin2