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Merge pull request #260 from cBioPortal/jjgao-patch-1
Create PULL_REQUEST_TEMPLATE.md
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.github/PULL_REQUEST_TEMPLATE.md

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# What?
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Fix # .
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Cancer studies updated in this pull request:
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- a
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- .
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# checks
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For all pull requests:
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- [ ] Passes validation
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For a new study (in addition to above):
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- [ ] Does study name and study ID follow our convention? e.g. Tumor_Type (Institue, Journal Year); brca_mskcc_2015
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- [ ] is study meta data complete? e.g. pmid, group of PUBLIC
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- [ ] were all samples profiled with WES/WGS? If not, is gene panel file curated?
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- [ ] are oncotree codes of all samples curated; Cancer Type and Cancer Type Detailed needs to be added in addition to Oncotree Code
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- [ ] clinical sample and patient data with meta files
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- [ ] mutations data with meta files
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- [ ] MAF is based on hg19
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- [ ] MAF with 2 isoforms: uniprot and mskcc
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- [ ] CNA data with meta files
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- [ ] CNA segment data with meta files
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- [ ] Expression data including z-scores with meta files
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- [ ] Case-lists for all profiles.
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- [ ] Manual checking (Niki or JJ): Triage or private Portal link here
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