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+ # What?
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+ Fix # .
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+ Cancer studies updated in this pull request:
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+ - a
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+ - .
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+ # checks
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+ For all pull requests:
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+ - [ ] Passes validation
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+ For a new study (in addition to above):
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+ - [ ] Does study name and study ID follow our convention? e.g. Tumor_Type (Institue, Journal Year); brca_mskcc_2015
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+ - [ ] is study meta data complete? e.g. pmid, group of PUBLIC
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+ - [ ] were all samples profiled with WES/WGS? If not, is gene panel file curated?
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+ - [ ] are oncotree codes of all samples curated; Cancer Type and Cancer Type Detailed needs to be added in addition to Oncotree Code
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+ - [ ] clinical sample and patient data with meta files
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+ - [ ] mutations data with meta files
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+ - [ ] MAF is based on hg19
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+ - [ ] MAF with 2 isoforms: uniprot and mskcc
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+ - [ ] CNA data with meta files
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+ - [ ] CNA segment data with meta files
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+ - [ ] Expression data including z-scores with meta files
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+ - [ ] Case-lists for all profiles.
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+ - [ ] Manual checking (Niki or JJ): Triage or private Portal link here
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