v0.5.4

Bug fixes:

• fix AIRR output header
• fix vdj_aa translation
• update tests
• update CI to add python 3.8 and 3.9
• update requirements to use scikit-bio==0.5.6

v0.5.3

fix bug when building AIRR-formatted output

v0.5.2

fix a bug in the abstar API when running with just an input file and not a list of Sequence objects.

v0.5.1

• fixed bugs in the doc building process
• updated the humouse germline database to remove a typo in the species name

v0.5.0

• updated the AIRR-C compatible output option to be more complete (format specification can be found here)
• updated abstar.run() to enable multi-threaded processing when passing Sequence objects as input

v0.4.11

bugfixes

v0.4.10

• add the ability for species information to be incorporated into gene names when creating germline databases (helpful for multi-species databases, such as those used for humanized mouse models)
• update make_abstar_germline_db to optionally parse species info from gapped IMGT input files and incorporate into the gene names
• replace the vrc01mouse germline database (which contained human IGHV1-2*02 along with all other mouse variable germline genes) with a new humouse database which includes all mouse and human germline genes

v0.4.9

bugfixes

v0.4.8

define dtype for select tabular fields prior to parquet conversion

v0.4.7

Fix tabular output headers