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mod.rs
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// Copyright 2022-2023 CeresDB Project Authors. Licensed under Apache-2.0.
//! MemTable based on skiplist
pub mod factory;
pub mod iter;
use std::{
cmp::Ordering,
convert::TryInto,
sync::atomic::{self, AtomicU64, AtomicUsize},
};
use arena::{Arena, BasicStats};
use common_types::{
bytes::Bytes,
row::{contiguous::ContiguousRowWriter, Row},
schema::Schema,
SequenceNumber,
};
use common_util::{codec::Encoder, error::BoxError};
use log::{debug, trace};
use skiplist::{KeyComparator, Skiplist};
use snafu::{ensure, ResultExt};
use crate::memtable::{
key::{ComparableInternalKey, KeySequence},
skiplist::iter::{ColumnarIterImpl, ReversedColumnarIterator},
ColumnarIterPtr, EncodeInternalKey, InvalidPutSequence, InvalidRow, MemTable,
Metrics as MemtableMetrics, PutContext, Result, ScanContext, ScanRequest,
};
#[derive(Default, Debug)]
struct Metrics {
row_raw_size: AtomicUsize,
row_encoded_size: AtomicUsize,
row_count: AtomicUsize,
}
/// MemTable implementation based on skiplist
pub struct SkiplistMemTable<A: Arena<Stats = BasicStats> + Clone + Sync + Send> {
/// Schema of this memtable, is immutable.
schema: Schema,
skiplist: Skiplist<BytewiseComparator, A>,
/// The last sequence of the rows in this memtable. Update to this field
/// require external synchronization.
last_sequence: AtomicU64,
metrics: Metrics,
}
impl<A: Arena<Stats = BasicStats> + Clone + Sync + Send + 'static> MemTable
for SkiplistMemTable<A>
{
fn schema(&self) -> &Schema {
&self.schema
}
fn min_key(&self) -> Option<Bytes> {
let mut iter = self.skiplist.iter();
iter.seek_to_first();
if !iter.valid() {
None
} else {
Some(iter.key().to_vec().into())
}
}
fn max_key(&self) -> Option<Bytes> {
let mut iter = self.skiplist.iter();
iter.seek_to_last();
if !iter.valid() {
None
} else {
Some(iter.key().to_vec().into())
}
}
// TODO(yingwen): Encode value if value_buf is not set.
// Now the caller is required to encode the row into the `value_buf` in
// PutContext first.
fn put(
&self,
ctx: &mut PutContext,
sequence: KeySequence,
row: &Row,
schema: &Schema,
) -> Result<()> {
trace!("skiplist put row, sequence:{:?}, row:{:?}", sequence, row);
let key_encoder = ComparableInternalKey::new(sequence, schema);
let internal_key = &mut ctx.key_buf;
// Reset key buffer
internal_key.clear();
// Reserve capacity for key
internal_key.reserve(key_encoder.estimate_encoded_size(row));
// Encode key
key_encoder
.encode(internal_key, row)
.context(EncodeInternalKey)?;
// Encode row value. The ContiguousRowWriter will clear the buf.
let row_value = &mut ctx.value_buf;
let mut row_writer = ContiguousRowWriter::new(row_value, schema, &ctx.index_in_writer);
row_writer.write_row(row).box_err().context(InvalidRow)?;
let encoded_size = internal_key.len() + row_value.len();
self.skiplist.put(internal_key, row_value);
// Update metrics
self.metrics
.row_raw_size
.fetch_add(row.size(), atomic::Ordering::Relaxed);
self.metrics
.row_count
.fetch_add(1, atomic::Ordering::Relaxed);
self.metrics
.row_encoded_size
.fetch_add(encoded_size, atomic::Ordering::Relaxed);
Ok(())
}
fn scan(&self, ctx: ScanContext, request: ScanRequest) -> Result<ColumnarIterPtr> {
debug!(
"Scan skiplist memtable, ctx:{:?}, request:{:?}",
ctx, request
);
let num_rows = self.skiplist.len();
let (reverse, batch_size) = (request.reverse, ctx.batch_size);
let iter = ColumnarIterImpl::new(self, ctx, request)?;
if reverse {
Ok(Box::new(ReversedColumnarIterator::new(
iter, num_rows, batch_size,
)))
} else {
Ok(Box::new(iter))
}
}
fn approximate_memory_usage(&self) -> usize {
// Mem size of skiplist is u32, need to cast to usize
match self.skiplist.mem_size().try_into() {
Ok(v) => v,
// The skiplist already use bytes larger than usize
Err(_) => usize::MAX,
}
}
fn set_last_sequence(&self, sequence: SequenceNumber) -> Result<()> {
let last = self.last_sequence();
ensure!(
sequence >= last,
InvalidPutSequence {
given: sequence,
last
}
);
self.last_sequence
.store(sequence, atomic::Ordering::Relaxed);
Ok(())
}
fn last_sequence(&self) -> SequenceNumber {
self.last_sequence.load(atomic::Ordering::Relaxed)
}
fn metrics(&self) -> MemtableMetrics {
let row_raw_size = self.metrics.row_raw_size.load(atomic::Ordering::Relaxed);
let row_encoded_size = self
.metrics
.row_encoded_size
.load(atomic::Ordering::Relaxed);
let row_count = self.metrics.row_count.load(atomic::Ordering::Relaxed);
MemtableMetrics {
row_raw_size,
row_encoded_size,
row_count,
}
}
}
#[derive(Debug, Clone)]
pub struct BytewiseComparator;
impl KeyComparator for BytewiseComparator {
#[inline]
fn compare_key(&self, lhs: &[u8], rhs: &[u8]) -> Ordering {
lhs.cmp(rhs)
}
#[inline]
fn same_key(&self, lhs: &[u8], rhs: &[u8]) -> bool {
lhs == rhs
}
}
#[cfg(test)]
mod tests {
use std::{ops::Bound, sync::Arc};
use arena::NoopCollector;
use common_types::{
bytes::ByteVec,
datum::Datum,
projected_schema::ProjectedSchema,
record_batch::RecordBatchWithKey,
schema::IndexInWriterSchema,
tests::{build_row, build_schema},
time::Timestamp,
};
use common_util::codec::memcomparable::MemComparable;
use super::*;
use crate::memtable::{
factory::{Factory, Options},
skiplist::factory::SkiplistMemTableFactory,
};
fn test_memtable_scan_for_scan_request(
schema: Schema,
memtable: Arc<dyn MemTable + Send + Sync>,
) {
let projection: Vec<usize> = (0..schema.num_columns()).collect();
let projected_schema = ProjectedSchema::new(schema, Some(projection)).unwrap();
let testcases = vec![
(
// limited by sequence
ScanRequest {
start_user_key: Bound::Unbounded,
end_user_key: Bound::Unbounded,
sequence: 2,
projected_schema: projected_schema.clone(),
need_dedup: true,
reverse: false,
metrics_collector: None,
},
vec![
build_row(b"a", 1, 10.0, "v1", 1000, 1_000_000),
build_row(b"b", 2, 10.0, "v2", 2000, 2_000_000),
build_row(b"c", 3, 10.0, "v3", 3000, 3_000_000),
build_row(b"d", 4, 10.0, "v4", 4000, 4_000_000),
build_row(b"e", 5, 10.0, "v5", 5000, 5_000_000),
build_row(b"f", 6, 10.0, "v6", 6000, 6_000_000),
],
),
(
// limited by sequence and start/end key
ScanRequest {
start_user_key: Bound::Included(build_scan_key("a", 1)),
end_user_key: Bound::Excluded(build_scan_key("e", 5)),
sequence: 2,
projected_schema: projected_schema.clone(),
need_dedup: true,
reverse: false,
metrics_collector: None,
},
vec![
build_row(b"a", 1, 10.0, "v1", 1000, 1_000_000),
build_row(b"b", 2, 10.0, "v2", 2000, 2_000_000),
build_row(b"c", 3, 10.0, "v3", 3000, 3_000_000),
build_row(b"d", 4, 10.0, "v4", 4000, 4_000_000),
],
),
(
// limited by sequence and start/end key
// but seq is one smaller than last case
ScanRequest {
start_user_key: Bound::Included(build_scan_key("a", 1)),
end_user_key: Bound::Excluded(build_scan_key("e", 5)),
sequence: 1,
projected_schema,
need_dedup: true,
reverse: false,
metrics_collector: None,
},
vec![
build_row(b"a", 1, 10.0, "v1", 1000, 1_000_000),
build_row(b"b", 2, 10.0, "v2", 2000, 2_000_000),
build_row(b"c", 3, 10.0, "v3", 3000, 3_000_000),
],
),
];
for (req, expected) in testcases {
let scan_ctx = ScanContext::default();
let iter = memtable.scan(scan_ctx, req).unwrap();
check_iterator(iter, expected);
}
}
fn test_memtable_scan_for_projection(
schema: Schema,
memtable: Arc<dyn MemTable + Send + Sync>,
) {
let projection: Vec<usize> = (0..2).collect();
let projected_schema = ProjectedSchema::new(schema, Some(projection)).unwrap();
let testcases = vec![(
ScanRequest {
start_user_key: Bound::Included(build_scan_key("a", 1)),
end_user_key: Bound::Excluded(build_scan_key("e", 5)),
sequence: 2,
projected_schema,
need_dedup: true,
reverse: false,
metrics_collector: None,
},
vec![
build_row_for_two_column(b"a", 1),
build_row_for_two_column(b"b", 2),
build_row_for_two_column(b"c", 3),
build_row_for_two_column(b"d", 4),
],
)];
for (req, expected) in testcases {
let scan_ctx = ScanContext::default();
let iter = memtable.scan(scan_ctx, req).unwrap();
check_iterator(iter, expected);
}
}
#[test]
fn test_memtable_scan() {
let schema = build_schema();
let factory = SkiplistMemTableFactory;
let memtable = factory
.create_memtable(Options {
schema: schema.clone(),
arena_block_size: 512,
creation_sequence: 1,
collector: Arc::new(NoopCollector {}),
})
.unwrap();
let mut ctx = PutContext::new(IndexInWriterSchema::for_same_schema(schema.num_columns()));
let input = vec![
(
KeySequence::new(1, 1),
build_row(b"a", 1, 10.0, "v1", 1000, 1_000_000),
),
(
KeySequence::new(1, 2),
build_row(b"b", 2, 10.0, "v2", 2000, 2_000_000),
),
(
KeySequence::new(1, 3),
build_row(
b"c",
3,
10.0,
"primary_key same with next row",
3000,
3_000_000,
),
),
(
KeySequence::new(1, 4),
build_row(b"c", 3, 10.0, "v3", 3000, 3_000_000),
),
(
KeySequence::new(2, 1),
build_row(b"d", 4, 10.0, "v4", 4000, 4_000_000),
),
(
KeySequence::new(2, 1),
build_row(b"e", 5, 10.0, "v5", 5000, 5_000_000),
),
(
KeySequence::new(2, 3),
build_row(b"f", 6, 10.0, "v6", 6000, 6_000_000),
),
(
KeySequence::new(3, 4),
build_row(b"g", 7, 10.0, "v7", 7000, 7_000_000),
),
];
for (seq, row) in input {
memtable.put(&mut ctx, seq, &row, &schema).unwrap();
}
test_memtable_scan_for_scan_request(schema.clone(), memtable.clone());
test_memtable_scan_for_projection(schema, memtable);
}
fn check_iterator<T: Iterator<Item = Result<RecordBatchWithKey>>>(
iter: T,
expected_rows: Vec<Row>,
) {
let mut visited_rows = 0;
for batch in iter {
let batch = batch.unwrap();
for row_idx in 0..batch.num_rows() {
assert_eq!(batch.clone_row_at(row_idx), expected_rows[visited_rows]);
visited_rows += 1;
}
}
assert_eq!(visited_rows, expected_rows.len());
}
fn build_scan_key(c1: &str, c2: i64) -> Bytes {
let mut buf = ByteVec::new();
let encoder = MemComparable;
encoder.encode(&mut buf, &Datum::from(c1)).unwrap();
encoder.encode(&mut buf, &Datum::from(c2)).unwrap();
Bytes::from(buf)
}
pub fn build_row_for_two_column(key1: &[u8], key2: i64) -> Row {
let datums = vec![
Datum::Varbinary(Bytes::copy_from_slice(key1)),
Datum::Timestamp(Timestamp::new(key2)),
];
Row::from_datums(datums)
}
}