Skip to content

Find circular RNA Fusion from Output of Annotate command #68

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
manjumoorthy95 opened this issue Jun 4, 2023 · 0 comments
Open

Find circular RNA Fusion from Output of Annotate command #68

manjumoorthy95 opened this issue Jun 4, 2023 · 0 comments

Comments

@manjumoorthy95
Copy link

The reason I ran circexplorer2 is to know if the RNA contains any Fusions which are circular in nature. So in the Output of Circexplorer2 Annotate command, I see only single gene being annotated. If they are fusions then 2 genes should be involved right?

PS: The file being given as input to the Annotate module is the back spliced junctions bed file generated from Parse command of Star chimeric files.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant