Skip to content

Commit 0933c68

Browse files
committed
changed bam_name to name in bqsr
1 parent f388db6 commit 0933c68

File tree

1 file changed

+1
-1
lines changed

1 file changed

+1
-1
lines changed

modules/05_bqsr.nf

+1-1
Original file line numberDiff line numberDiff line change
@@ -18,7 +18,7 @@ process BQSR {
1818
val(reference)
1919

2020
output:
21-
tuple val("${name}"), val("${type}"), val("${params.output}/${name}/${bam_name}.preprocessed.bam"), emit: recalibrated_bams
21+
tuple val("${name}"), val("${type}"), val("${params.output}/${name}/${name}.preprocessed.bam"), emit: recalibrated_bams
2222
file "${name}.recalibration_report.grp"
2323
file "${name}.preprocessed.bam"
2424
file "${name}.preprocessed.bai"

0 commit comments

Comments
 (0)