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Coverage tracking #121

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mcol opened this issue Aug 6, 2024 · 1 comment
Closed

Coverage tracking #121

mcol opened this issue Aug 6, 2024 · 1 comment
Milestone
v0.9.25

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@mcol
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mcol commented Aug 6, 2024 •
edited
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This is a snapshot of the current state of test coverage on master, so we can track the progress:

Luminescence Coverage: 76.27%
R/addins_RLum.R: 0.00%
R/install_DevelopmentVersion.R: 0.00%
R/internals_Thermochronometry.R: 0.00%
R/calc_OSLLxTxDecomposed.R: 4.08%
R/analyse_pIRIRSequence.R: 26.60%
R/plot_DRTResults.R: 34.25%
R/verify_SingleGrainData.R: 40.44%
R/Risoe.BINfileData2RLum.Analysis.R: 43.65%
R/zzz.R: 43.83%
R/internal_as.latex.table.R: 48.53%
R/methods_RLum.R: 49.51%
R/plot_RLum.Results.R: 49.84%
R/Second2Gray.R: 55.26%
R/plot_AbanicoPlot.R: 55.90%
R/plot_Histogram.R: 56.34%
R/get_RLum.R: 57.14%
R/calc_MinDose.R: 57.57%
R/fit_EmissionSpectra.R: 59.21%
R/RLum.Results-class.R: 59.42%
R/calc_FastRatio.R: 60.32%
R/fit_LMCurve.R: 61.47%
R/fit_SurfaceExposure.R: 61.47%
R/fit_CWCurve.R: 62.68%
R/plot_RadialPlot.R: 64.03%
R/analyse_baSAR.R: 65.62%
R/calc_Huntley2006.R: 66.10%
R/get_Layout.R: 66.67%
R/calc_CosmicDoseRate.R: 67.38%
R/plot_FilterCombinations.R: 67.76%
R/convert_Daybreak2CSV.R: 68.18%
R/read_TIFF2R.R: 70.00%
R/plot_KDE.R: 71.01%
R/plot_NRt.R: 71.21%
R/calc_AverageDose.R: 71.90%
R/analyse_Al2O3C_Measurement.R: 72.06%
R/read_SPE2R.R: 73.83%
R/fit_OSLLifeTimes.R: 74.02%
R/plot_ViolinPlot.R: 74.42%
R/calc_gSGC.R: 74.51%
R/calc_CommonDose.R: 75.00%
R/calc_MaxDose.R: 75.00%
R/merge_RLum.R: 75.00%
R/plot_Risoe.BINfileData.R: 75.00%
R/extract_IrradiationTimes.R: 76.19%
R/analyse_Al2O3C_ITC.R: 76.92%
R/merge_RLum.Analysis.R: 76.92%
R/analyse_FadingMeasurement.R: 79.18%
R/merge_RLum.Data.Curve.R: 79.75%
R/plot_RLum.Analysis.R: 79.90%
src/src_create_RLumDataCurve_matrix.cpp: 80.00%
R/analyse_IRSAR.RF.R: 80.08%
R/read_BIN2R.R: 80.75%
R/use_DRAC.R: 82.00%
R/analyse_SAR.TL.R: 83.03%
R/read_XSYG2R.R: 83.33%
R/plot_DRCSummary.R: 83.46%
R/report_RLum.R: 83.60%
R/plot_DetPlot.R: 84.02%
R/calc_WodaFuchs2008.R: 84.16%
R/Risoe.BINfileData2RLum.Data.Curve.R: 84.62%
R/calc_FadingCorr.R: 84.88%
R/merge_RLum.Results.R: 85.19%
R/analyse_SAR.CWOSL.R: 86.84%
R/write_R2TIFF.R: 86.96%
R/analyse_Al2O3C_CrossTalk.R: 87.50%
R/calc_FuchsLang2001.R: 87.95%
R/calc_HomogeneityTest.R: 88.00%
R/merge_Risoe.BINfileData.R: 88.24%
R/apply_CosmicRayRemoval.R: 88.41%
R/write_RLum2CSV.R: 88.51%
R/write_R2BIN.R: 88.60%
R/plot_RLum.Data.Curve.R: 90.43%
R/plot_RLum.Data.Spectrum.R: 90.51%
R/calc_FiniteMixture.R: 90.61%
R/convert_XSYG2CSV.R: 91.30%
R/Risoe.BINfileData-class.R: 91.30%
R/plot_GrowthCurve.R: 91.82%
R/plot_RLum.Data.Image.R: 92.13%
R/import_Data.R: 92.86%
R/convert_RLum2Risoe.BINfileData.R: 93.07%
R/read_Daybreak2R.R: 93.53%
R/combine_De_Dr.R: 93.92%
R/RLum.Analysis-class.R: 93.94%
R/trim_RLum.Data.R: 94.03%
R/analyse_portableOSL.R: 94.43%
R/methods_DRAC.R: 94.92%
R/convert_BIN2CSV.R: 95.00%
R/convert_Wavelength2Energy.R: 95.24%
R/github.R: 95.38%
R/internals_RLum.R: 95.57%
R/apply_EfficiencyCorrection.R: 95.65%
R/calc_Lamothe2003.R: 96.55%
R/calc_TLLxTxRatio.R: 96.72%
R/calc_CobbleDoseRate.R: 96.90%
R/Analyse_SAR.OSLdata.R: 97.22%
R/PSL2Risoe.BINfileData.R: 97.41%
R/plot_RLum.R: 97.73%
R/read_PSL2R.R: 97.78%
R/read_RF2R.R: 98.13%
R/utils_DRAC.R: 98.32%
R/calc_gSGC_feldspar.R: 98.33%
R/RLum.Data.Curve-class.R: 98.90%
R/bin_RLum.Data.R: 100.00%
R/calc_AliquotSize.R: 100.00%
R/calc_CentralDose.R: 100.00%
R/calc_IEU.R: 100.00%
R/calc_Kars2008.R: 100.00%
R/calc_OSLLxTxRatio.R: 100.00%
R/calc_SourceDoseRate.R: 100.00%
R/calc_Statistics.R: 100.00%
R/calc_ThermalLifetime.R: 100.00%
R/convert_Activity2Concentration.R: 100.00%
R/convert_Concentration2DoseRate.R: 100.00%
R/convert_PSL2CSV.R: 100.00%
R/convert_SG2MG.R: 100.00%
R/CW2pHMi.R: 100.00%
R/CW2pLM.R: 100.00%
R/CW2pLMi.R: 100.00%
R/CW2pPMi.R: 100.00%
R/extract_ROI.R: 100.00%
R/fit_ThermalQuenching.R: 100.00%
R/get_Quote.R: 100.00%
R/get_rightAnswer.R: 100.00%
R/get_Risoe.BINfileData.R: 100.00%
R/length_RLum.R: 100.00%
R/names_RLum.R: 100.00%
R/plot_OSLAgeSummary.R: 100.00%
R/plot_ROI.R: 100.00%
R/replicate_RLum.R: 100.00%
R/RLum-class.R: 100.00%
R/RLum.Data.Image-class.R: 100.00%
R/RLum.Data.Spectrum-class.R: 100.00%
R/scale_GammaDose.R: 100.00%
R/set_Risoe.BINfileData.R: 100.00%
R/set_RLum.R: 100.00%
R/smooth_RLum.R: 100.00%
R/structure_RLum.R: 100.00%
R/subset_SingleGrainData.R: 100.00%
R/template_DRAC.R: 100.00%
R/tune_Data.R: 100.00%
src/create_UID.cpp: 100.00%
src/src_analyse_IRSARRF_SRS.cpp: 100.00%
src/src_get_XSYG_curve_values.cpp: 100.00%

This was produced with:

Sys.setenv(NOT_CRAN = "true")
covr::package_coverage()
This was referenced Aug 6, 2024
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@RLumSK RLumSK added this to the Release version 1.0.0 milestone Aug 12, 2024
This was referenced Aug 12, 2024
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This was referenced Aug 19, 2024
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This was referenced Aug 28, 2024
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This was referenced Sep 4, 2024
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@mcol
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mcol commented Sep 16, 2024

These are the results with 0.9.25:

Luminescence Coverage: 95.14%
R/internals_Thermochronometry.R: 0.00%
src/src_create_RLumDataCurve_matrix.cpp: 80.00%
R/analyse_baSAR.R: 85.59%
R/analyse_pIRIRSequence.R: 87.53%
R/plot_RLum.Analysis.R: 88.05%
R/read_SPE2R.R: 88.67%
R/analyse_IRSAR.RF.R: 88.99%
R/Second2Gray.R: 89.47%
R/read_XSYG2R.R: 90.24%
R/calc_MinDose.R: 90.79%
R/analyse_FadingMeasurement.R: 90.86%
R/analyse_Al2O3C_Measurement.R: 91.48%
R/use_DRAC.R: 91.67%
R/calc_CosmicDoseRate.R: 91.94%
R/extract_IrradiationTimes.R: 92.00%
R/plot_AbanicoPlot.R: 92.67%
R/report_RLum.R: 92.71%
R/import_Data.R: 93.33%
R/analyse_SAR.CWOSL.R: 93.41%
R/read_BIN2R.R: 93.83%
R/calc_AliquotSize.R: 93.84%
R/read_HeliosOSL2R.R: 93.85%
R/plot_RLum.Results.R: 93.92%
R/calc_AverageDose.R: 93.93%
R/fit_OSLLifeTimes.R: 93.99%
R/trim_RLum.Data.R: 94.03%
R/fit_LMCurve.R: 94.24%
R/calc_Huntley2006.R: 94.43%
R/calc_gSGC.R: 94.58%
R/methods_DRAC.R: 94.92%
R/verify_SingleGrainData.R: 95.11%
R/github.R: 95.38%
R/fit_CWCurve.R: 95.47%
R/plot_KDE.R: 95.72%
R/plot_RLum.Data.Spectrum.R: 95.76%
R/merge_Risoe.BINfileData.R: 96.08%
R/merge_RLum.Data.Curve.R: 96.15%
R/plot_GrowthCurve.R: 96.31%
R/plot_DRTResults.R: 96.42%
R/get_RLum.R: 96.43%
R/analyse_portableOSL.R: 96.68%
R/Risoe.BINfileData2RLum.Analysis.R: 96.84%
R/calc_CobbleDoseRate.R: 96.90%
R/analyse_SAR.TL.R: 96.94%
R/calc_FastRatio.R: 97.00%
R/plot_Risoe.BINfileData.R: 97.01%
R/calc_FiniteMixture.R: 97.13%
R/Analyse_SAR.OSLdata.R: 97.22%
R/plot_NRt.R: 97.33%
R/RLum.Analysis-class.R: 97.45%
R/plot_RLum.R: 97.73%
R/plot_DRCSummary.R: 97.74%
R/plot_DetPlot.R: 97.79%
R/combine_De_Dr.R: 97.95%
R/calc_OSLLxTxDecomposed.R: 98.08%
R/zzz.R: 98.15%
R/utils_DRAC.R: 98.32%
R/internal_as.latex.table.R: 98.50%
R/internals_RLum.R: 98.70%
R/write_RLum2CSV.R: 98.82%
R/calc_gSGC_feldspar.R: 98.90%
R/RLum.Data.Curve-class.R: 98.90%
R/convert_RLum2Risoe.BINfileData.R: 99.01%
R/methods_RLum.R: 99.04%
R/plot_RadialPlot.R: 99.05%
R/plot_Histogram.R: 99.19%
R/fit_SurfaceExposure.R: 99.55%
R/fit_EmissionSpectra.R: 99.67%
R/write_R2BIN.R: 99.87%
R/analyse_Al2O3C_CrossTalk.R: 100.00%
R/analyse_Al2O3C_ITC.R: 100.00%
R/apply_CosmicRayRemoval.R: 100.00%
R/apply_EfficiencyCorrection.R: 100.00%
R/bin_RLum.Data.R: 100.00%
R/calc_CentralDose.R: 100.00%
R/calc_CommonDose.R: 100.00%
R/calc_FadingCorr.R: 100.00%
R/calc_FuchsLang2001.R: 100.00%
R/calc_HomogeneityTest.R: 100.00%
R/calc_IEU.R: 100.00%
R/calc_Kars2008.R: 100.00%
R/calc_Lamothe2003.R: 100.00%
R/calc_MaxDose.R: 100.00%
R/calc_OSLLxTxRatio.R: 100.00%
R/calc_SourceDoseRate.R: 100.00%
R/calc_Statistics.R: 100.00%
R/calc_ThermalLifetime.R: 100.00%
R/calc_TLLxTxRatio.R: 100.00%
R/calc_WodaFuchs2008.R: 100.00%
R/convert_Activity2Concentration.R: 100.00%
R/convert_BIN2CSV.R: 100.00%
R/convert_Concentration2DoseRate.R: 100.00%
R/convert_Daybreak2CSV.R: 100.00%
R/convert_PSL2CSV.R: 100.00%
R/convert_SG2MG.R: 100.00%
R/convert_Wavelength2Energy.R: 100.00%
R/convert_XSYG2CSV.R: 100.00%
R/CW2pHMi.R: 100.00%
R/CW2pLM.R: 100.00%
R/CW2pLMi.R: 100.00%
R/CW2pPMi.R: 100.00%
R/extract_ROI.R: 100.00%
R/fit_ThermalQuenching.R: 100.00%
R/get_Layout.R: 100.00%
R/get_Quote.R: 100.00%
R/get_rightAnswer.R: 100.00%
R/get_Risoe.BINfileData.R: 100.00%
R/length_RLum.R: 100.00%
R/merge_RLum.Analysis.R: 100.00%
R/merge_RLum.R: 100.00%
R/merge_RLum.Results.R: 100.00%
R/names_RLum.R: 100.00%
R/plot_FilterCombinations.R: 100.00%
R/plot_OSLAgeSummary.R: 100.00%
R/plot_RLum.Data.Curve.R: 100.00%
R/plot_RLum.Data.Image.R: 100.00%
R/plot_ROI.R: 100.00%
R/plot_ViolinPlot.R: 100.00%
R/PSL2Risoe.BINfileData.R: 100.00%
R/read_Daybreak2R.R: 100.00%
R/read_PSL2R.R: 100.00%
R/read_RF2R.R: 100.00%
R/read_TIFF2R.R: 100.00%
R/replicate_RLum.R: 100.00%
R/Risoe.BINfileData-class.R: 100.00%
R/Risoe.BINfileData2RLum.Data.Curve.R: 100.00%
R/RLum-class.R: 100.00%
R/RLum.Data.Image-class.R: 100.00%
R/RLum.Data.Spectrum-class.R: 100.00%
R/RLum.Results-class.R: 100.00%
R/scale_GammaDose.R: 100.00%
R/set_Risoe.BINfileData.R: 100.00%
R/set_RLum.R: 100.00%
R/smooth_RLum.R: 100.00%
R/structure_RLum.R: 100.00%
R/subset_SingleGrainData.R: 100.00%
R/template_DRAC.R: 100.00%
R/tune_Data.R: 100.00%
R/write_R2TIFF.R: 100.00%
src/create_UID.cpp: 100.00%
src/src_analyse_IRSARRF_SRS.cpp: 100.00%
src/src_get_XSYG_curve_values.cpp: 100.00%

@mcol mcol closed this as completed Sep 16, 2024
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