-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathcassava-trait-ontology_withcropname.obo
2570 lines (2207 loc) · 75.5 KB
/
cassava-trait-ontology_withcropname.obo
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
format-version: 1.2
saved-by: cooperl
default-namespace: CO_334_cassava
ontology: co_334
[Term]
id: CO_334:0000027
name: cassava bacterial disease trait
def: "Traits related to incidence and severity of cassava response to bacterial pathogens." [CO:curators]
created_by: BAKARE
creation_date: 2010-11-08T06:42:36Z
is_a: TO:0000315 ! bacterial disease response trait
[Term]
id: CO_334:0000028
name: cassava viral disease trait
def: "Traits related to incidence and severity of cassava response to viral pathogens." [CO:curators]
created_by: BAKARE
creation_date: 2010-11-08T06:43:31Z
is_a: TO:0000148 ! viral disease response trait
[Term]
id: CO_334:0000029
name: cassava fungal disease trait
def: "Traits related to incidence and severity of cassava response to fungal pathogens." [CO:curators]
created_by: BAKARE
creation_date: 2010-11-08T06:44:26Z
is_a: TO:0000439 ! fungal disease response trait
[Term]
id: CO_334:0000030
name: cassava insect damage trait
def: "Traits related to damage caused by insects." [CO:curators]
created_by: BAKARE
creation_date: 2010-11-08T06:45:42Z
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000031
name: cassava bacterial blight severity trait
def: "Severity of bacterial blight disease caused by Xanthomonas axonopodis pv. Manihotis" [CO:curators]
synonym: "cassava bacterial blight severity - Cassavabase" EXACT []
synonym: "CBBSev" EXACT []
is_a: TO:0000770 ! bacterial blight disease response
[Term]
id: CO_334:0000032
name: cassava anthracnose disease severity trait
def: "Severity of the cassava anthracnose disease caused by Colletotrichum gloeosporioides f. sp." [CO:curators]
synonym: "CADSev" EXACT []
synonym: "cassava anthracnose disease severity - Cassavabase" EXACT []
is_a: TO:0001145 ! Ascomycete fungal disease response
[Term]
id: CO_334:0000033
name: cassava green mite severity trait
def: "Severity of the damage caused by cassava green mite" [CO:curators]
synonym: "cassava green mite severity - Cassavabase" EXACT []
synonym: "CGMSev" EXACT []
is_a: TO:0020121 ! arachnid damage response trait
[Term]
id: CO_334:0000035
name: cassava mosaic disease severity trait
def: "Severity of the symptoms caused by the cassava mosaic virus, in the family Geminiviridae and genus Begomovirus" [CO:curators]
synonym: "cassava mosaic disease severity - Cassavabase" EXACT []
synonym: "CMDSev" EXACT []
is_a: TO:0000148 ! viral disease response trait
[Term]
id: CO_334:0000036
name: cassava brown streak disease leaf severity trait
def: "Severity of the symptoms on leaf caused by cassava brown streak virus in the family of Potyviridae and genus Ipomovirus" [CO:curators]
synonym: "cassava brown streak disease leaf severity - Cassavabase" EXACT []
synonym: "CBSDRtSev" EXACT []
is_a: TO:0000148 ! viral disease response trait
[Term]
id: CO_334:0000037
name: cassava bacterial blight incidence trait
def: "Incidence of the cassava bacterial blight" [CO:curators]
synonym: "CBBInc" EXACT []
is_a: TO:0000770 ! bacterial blight disease response
[Term]
id: CO_334:0000038
name: cassava anthracnose disease incidence trait
def: "Proportion of plants within a plot showing symptoms of cassava anthracnose disease" [CO:curators]
synonym: "cadi" EXACT []
is_a: TO:0001145 ! Ascomycete fungal disease response
[Term]
id: CO_334:0000039
name: cassava mosaic disease incidence trait
def: "Proportion of plants within a plot showing symptoms of cassava mosaic disease" [CO:curators]
synonym: "cmdi" EXACT []
is_a: TO:0000148 ! viral disease response
[Term]
id: CO_334:0000040
name: cassava brown streak disease leaf incidence trait
def: "Proportion of plants within a plot showing symptoms of cassava brown streak disease" [CO:curators]
synonym: "cbsdli" EXACT []
is_a: TO:0000148 ! viral disease response trait
[Term]
id: CO_334:0000089
name: cassava brown streak disease root incidence trait
def: "Proportion of plants within a plot showing root symptoms of cassava brown streak disease" [CO:curators]
synonym: "cbsdr12i" EXACT []
is_a: TO:0000148 ! viral disease response
[Term]
id: CO_334:0000090
name: cassava brown streak disease root severity trait
def: "cassava brown streak disease root symptoms severity" [CO:curators]
synonym: "cassava brown streak disease root severity - Cassavabase" EXACT []
synonym: "CBSDLfSev" EXACT []
is_a: TO:0000148 ! viral disease response trait
[Term]
id: CO_334:0000122
name: cassava green mite incidence trait
def: "Proportion of plants affected by cassava green mite (Mononychellus tanajoa)" [CO:curators]
synonym: "cgmi" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000266
name: cassava post-harvest physiological deterioration trait
def: "Internal root discoloration or vascular streaking that renders cassava roots unfit for human or animal consumption." [CO:curators]
created_by: naama
creation_date: 2015-09-25T11:44:40Z
is_a: TO:0001042 ! root quality trait
[Term]
id: CO_334:0000267
name: cassava harvest index trait
def: "TBA." [TO:cooperl]
created_by: naama
creation_date: 2015-09-24T16:40:07Z
is_a: TO:0000128 ! harvest index
[Term]
id: CO_334:0000268
name: cassava shoot apices trait
def: "Structure/arrangement of shoot apices." [CO:curators]
synonym: "STS" RELATED []
created_by: AAfolabi
creation_date: 2015-09-28T18:02:43Z
is_a: TO:0000077 ! shoot system morphology trait
[Term]
id: CO_334:0000276
name: cassava abscisic acid content trait
def: "Abscisic acid content of leaf sample" [CO:curators]
synonym: "abscon" EXACT []
is_a: TO:0002667 ! abscisic acid content
[Term]
id: CO_334:0000277
name: cassava amylopectin content trait
def: "Amylopectin content" [CO:curators]
synonym: "amylp" EXACT []
is_a: TO:0000097 ! amylopectin content
[Term]
id: CO_334:0000278
name: cassava amylose amylopectin ratio trait
def: "Amylopectin:amylose ratio" [CO:curators]
synonym: "RtAmylProp" EXACT []
is_a: TO:0000372 ! amylose to amylopectin ratio
[Term]
id: CO_334:0000279
name: cassava amylose content trait
def: "Amylose content" [CO:curators]
synonym: "amyl" EXACT []
is_a: TO:0000196 ! amylose content
[Term]
id: CO_334:0000280
name: cassava anther color trait
def: "Color of anthers" [CO:curators]
synonym: "anther" EXACT []
is_a: TO:0000187 ! anther color
[Term]
id: CO_334:0000281
name: cassava anthocyanin pigmentation trait
def: "Distribution of anthocyanin pigmentation" [CO:curators]
synonym: "AnthrCPig" EXACT []
is_a: TO:0000071 ! anthocyanin content
[Term]
id: CO_334:0000282
name: cassava apical branching trait
def: "Time to first apical branching (associated with formation of inflorescence)" [CO:curators]
synonym: "BrnchTim" EXACT []
is_a: TO:0000933 ! plant phenological trait
[Term]
id: CO_334:0000283
name: cassava apical pubescence trait
def: "Pubescence of young leaves" [CO:curators]
synonym: "LfPub" EXACT []
is_a: TO:0002722 ! leaf pubescence
[Term]
id: CO_334:0000284
name: cassava ascorbic acid trait
def: "Ascorbic acid content" [CO:curators]
synonym: "Vitamin C" EXACT []
is_a: TO:0001143 ! antioxidant activity trait
[Term]
id: CO_334:0000285
name: cassava ash content trait
def: "Ash content" [CO:curators]
synonym: "ash" EXACT []
synonym: "Tuberous root mineral salt content" EXACT []
is_a: TO:0000607 ! ash content
[Term]
id: CO_334:0000286
name: cassava days to first male flower opens trait
def: "First male flower (pistillate) mature and opens." [CO:curators]
synonym: "flwdmo" EXACT []
is_a: TO:0000365 ! male flowering
[Term]
id: CO_334:0000287
name: cassava b crypto activity trait
def: "b-cryptoxanthin (carotenoid that has hydroxyl group with 50% activity) content" [CO:curators]
synonym: "BCryptoCt" EXACT []
is_a: TO:0020079 ! beta-cryptoxanthin content
[Term]
id: CO_334:0000288
name: cassava bemesia tabaci nymphs black trait
def: "Number of black bemesia tabaci nymphs on 14th leaf" [CO:curators]
synonym: "btwfb" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000289
name: cassava bemesia tabaci nymphs severity trait
def: "Severity of the chlorotic blotches on leaf caused by the nymphs of Bemesia tabaci" [CO:curators]
synonym: "BTNSev" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000290
name: cassava bemesia tabaci nymphs yellow
def: "Number of yellow bemesia tabaci nymphs on 14th leaf" [CO:curators]
synonym: "btwfy" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000291
name: cassava beta carotene trait
def: "beta-carotene (ug/g fresh wt)" [CO:curators]
synonym: "bc" EXACT []
is_a: TO:0002695 ! beta-carotene content
[Term]
id: CO_334:0000292
name: cassava beta carotenoid retention trait
def: "Beta carotene content after cooking" [CO:curators]
synonym: "BCaroRet" EXACT []
is_a: TO:0002695 ! beta-carotene content
[Term]
id: CO_334:0000293
name: cassava branch height trait
def: "Branch height" [CO:curators]
synonym: "branching" EXACT []
synonym: "BrnchHt" EXACT []
is_a: TO:1000008 ! branch position
[Term]
id: CO_334:0000294
name: cassava branching angle trait
def: "Angle of branching (Angle between vertical plane and first branches)" [CO:curators]
synonym: "brnang" EXACT []
is_a: TO:1000009 ! branch angle
[Term]
id: CO_334:0000295
name: cassava branching habit trait
def: "Branching habit" [CO:curators]
synonym: "brnhbt" EXACT []
is_a: TO:0000077 ! shoot system morphology trait
[Term]
id: CO_334:0000296
name: cassava branching levels trait
def: "Number of levels of branching (Actual number of levels (at harvest))" [CO:curators]
synonym: "brnlev" EXACT []
is_a: TO:0000077 ! shoot system morphology trait
[Term]
id: CO_334:0000297
name: cassava carotenoid content trait
def: "cassava storage root pulp carotenoid content" [CO:curators]
synonym: "CarotCt" EXACT []
is_a: TO:0000496 ! carotenoid content
[Term]
id: CO_334:0000298
name: cassava caruncle color trait
def: "Color of caruncle" [CO:curators]
synonym: "carcol" EXACT []
is_a: TO:1000010 ! caruncle color
[Term]
id: CO_334:0000302
name: cassava storage root weight by plot trait
def: "TBA." [TO:cooperl]
created_by: naama
creation_date: 2016-12-22T16:13:27Z
is_a: TO:0001041 ! root yield
[Term]
id: CO_334:0000303
name: cassava storage root weight by plant trait
def: "TBA." [TO:cooperl]
created_by: naama
creation_date: 2016-12-22T16:15:30Z
is_a: TO:0001041 ! root yield
[Term]
id: CO_334:0000305
name: cassava fresh shoot weight by plot trait
def: "TBA." [TO:cooperl]
created_by: naama
creation_date: 2016-12-22T16:23:13Z
is_a: TO:0000327 ! shoot system yield trait
[Term]
id: CO_334:0000306
name: cassava fresh shoot weight by plant trait
def: "TBA." [TO:cooperl]
created_by: naama
creation_date: 2016-12-22T16:23:29Z
is_a: TO:0000327 ! shoot system yield trait
[Term]
id: CO_334:0000339
name: cassava mealy bug incidence trait
def: "Proportion of plants within a plot showing symptoms of cassava mealy-bug damage (Phenacoccus Manihoti)" [CO:curators]
synonym: "cmbi" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000340
name: cassava mealy bug severity trait
def: "Severity of the damage caused by cassava mealy bug (Phenacoccus Manihoti)" [CO:curators]
synonym: "cassava Mealy Bug Severity - Cassavabase" EXACT []
synonym: "CMBSev" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000353
name: cassava central leaf shape trait
def: "Shape of central leaf taken from a mid-height position." [CO:curators]
synonym: "lfshp" EXACT []
is_a: TO:0000492 ! leaf shape
[Term]
id: CO_334:0000354
name: cassava cis 9 activity trait
def: "Cis 9 isomer activity" [CO:curators]
synonym: "cis-9" EXACT []
is_a: TO:0000289 ! carotene content
[Term]
id: CO_334:0000355
name: cassava color of boiled tuberous roots trait
def: "Color of boiled tuberous roots" [CO:curators]
synonym: "pdcol" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000356
name: cassava days to 50% anthesis trait
def: "50% of the female flower opened to expose the pistils per plot" [CO:curators]
synonym: "dyfl" EXACT []
synonym: "flw50a" EXACT []
is_a: TO:0002616 ! flowering time trait
[Term]
id: CO_334:0000357
name: cassava days to 50% branching trait
def: "Time to reach 50% of the plants at the branching stage" [CO:curators]
synonym: "flw50b" EXACT []
is_a: TO:0000933 ! plant phenological trait
[Term]
id: CO_334:0000358
name: cassava days to first anthesis trait
def: "Exposing of the pistil per plot of any female flower" [CO:curators]
synonym: "flwdfa" EXACT []
is_a: TO:0002616 ! flowering time trait
[Term]
id: CO_334:0000359
name: cassava days to first inflorescence trait
def: "Time to reach the first inflorescence" [CO:curators]
synonym: "flwdfi" EXACT []
is_a: TO:0002616 ! flowering time trait
[Term]
id: CO_334:0000360
name: cassava disc color trait
def: "Color of disc" [CO:curators]
synonym: "discol" EXACT []
is_a: TO:0000754 ! cardinal organ part morphology trait
[Term]
id: CO_334:0000361
name: cassava ease of harvest trait
def: "Ease of plant harvest" [CO:curators]
synonym: "easehav" EXACT []
is_a: TO:0001042 ! root quality trait
[Term]
id: CO_334:0000362
name: cassava ease of peeling root cortex trait
def: "Ease of root cortex removal" [CO:curators]
synonym: "easepl" EXACT []
is_a: TO:0001068 ! processing quality trait
[Term]
id: CO_334:0000364
name: cassava female flower number trait
def: "Number of female flowers after the buds appear" [CO:curators]
synonym: "FFlwNo" EXACT []
is_a: TO:0000987 ! pistillate flower number trait
[Term]
id: CO_334:0000365
name: cassava female stamenoids trait
def: "Presence of stamen in female cassava flowers" [CO:curators]
synonym: "femsta" EXACT []
is_a: TO:0000499 ! flower morphology trait
[Term]
id: CO_334:0000366
name: cassava fibre content trait
def: "Fibre content" [CO:curators]
synonym: "fibre" EXACT []
is_a: TO:0002642 ! fiber content
[Term]
id: CO_334:0000367
name: cassava flowering trait
def: "Abundance of flower" [CO:curators]
synonym: "flowerab" EXACT []
is_a: TO:0002736 ! flower number trait
[Term]
id: CO_334:0000369
name: cassava fresh shoot weight trait
def: "Total fresh weight of harvested foliage and stems" [CO:curators]
synonym: "ShFrWe" EXACT []
is_a: TO:0000571 ! shoot fresh weight
[Term]
id: CO_334:0000370
name: cassava frog skin disease trait
def: "Severity of the Frog skin disease caused by unknown causal agent" [CO:curators]
synonym: "fsd" EXACT []
is_a: TO:0000148 ! viral disease response trait
[Term]
id: CO_334:0000371
name: cassava fruit exocarp texture trait
def: "Texture of the outer most layer of the cassava fruit" [CO:curators]
synonym: "fruexo" EXACT []
is_a: TO:0002624 ! exocarp texture
[Term]
id: CO_334:0000372
name: cassava fruit set presence trait
def: "Fruit set" [CO:curators]
synonym: "frtset" EXACT []
is_a: TO:0000852 ! fruit set trait
[Term]
id: CO_334:0000373
name: cassava fufu content trait
def: "fufu weight" [CO:curators]
synonym: "fufucnt" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000374
name: cassava gari content trait
def: "gari content" [CO:curators]
synonym: "GarCt" EXACT []
synonym: "gari Content - Cassavabase" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000375
name: cassava gari shaft weight trait
def: "Shaft weight" [CO:curators]
synonym: "shaftwt" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000376
name: cassava gari weight after drying trait
def: "Weight after drying cassava flakes" [CO:curators]
synonym: "gdrywt" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000377
name: cassava gari weight after grinding trait
def: "Weight after grinding" [CO:curators]
synonym: "wtagrind" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000378
name: cassava gari fibre trait
def: "gari fibre" [CO:curators]
synonym: "gfibre" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000379
name: cassava gari sampled weight trait
def: "gari sampled weight" [CO:curators]
synonym: "gariwt" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000380
name: cassava gari starch trait
def: "Assessment of the starch content of gari" [CO:curators]
synonym: "gstarch" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000381
name: cassava gari taste trait
def: "Taste of gari" [CO:curators]
synonym: "gtaste" EXACT []
is_a: TO:0001069 ! cooking quality trait
[Term]
id: CO_334:0000382
name: cassava hairiness trait
def: "Hairiness" [CO:curators]
synonym: "hairiness" EXACT []
is_a: TO:0002722 ! leaf pubescence
[Term]
id: CO_334:0000386
name: cassava initial vigor trait
def: "Initial plant vigor at one month after planting" [CO:curators]
synonym: "vigor" EXACT []
is_a: TO:0000250 ! plant vigor trait
[Term]
id: CO_334:0000387
name: cassava iron content trait
def: "Iron content." [CO:curators]
synonym: "fe" EXACT []
is_a: TO:0020089 ! iron content trait
[Term]
id: CO_334:0000388
name: cassava lafun content trait
def: "Lafu weight" [CO:curators]
synonym: "lafun" EXACT []
is_a: TO:0001042 ! root quality trait
[Term]
id: CO_334:0000389
name: cassava leaf color trait
def: "Leaf color" [CO:curators]
synonym: "LfCol" EXACT []
is_a: TO:0000326 ! leaf color
[Term]
id: CO_334:0000390
name: cassava leaf life span trait
def: "Leaf life span" [CO:curators]
synonym: "LfLiife" EXACT []
is_a: TO:0000933 ! plant phenological trait
[Term]
id: CO_334:0000391
name: cassava leaf lobe length trait
def: "Length of middle finger or lobe of matured leaf" [CO:curators]
synonym: "LfLbLng" EXACT []
is_a: TO:1000014 ! leaf lamina lobe length
[Term]
id: CO_334:0000392
name: cassava leaf lobe margin trait
def: "leaf lobe margin." [CO:curators]
synonym: "LobMgnShp" EXACT []
is_a: TO:1000013 ! leaf lamina lobe morphology trait
[Term]
id: CO_334:0000393
name: cassava leaf lobe position trait
def: "Position in which leaf lobes are held" [CO:curators]
synonym: "lflobp" EXACT []
is_a: TO:1000013 ! leaf lamina lobe morphology trait
[Term]
id: CO_334:0000394
name: cassava leaf lobe width trait
def: "Width of middle finger or lobe of matured leaf" [CO:curators]
synonym: "LfLbWdth" EXACT []
is_a: TO:1000015 ! leaf lamina lobe width
[Term]
id: CO_334:0000395
name: cassava leaf lobes number trait
def: "Number of leaf lobes" [CO:curators]
synonym: "lflbno" EXACT []
is_a: TO:0000748 ! leaf morphology trait
[Term]
id: CO_334:0000396
name: cassava leaf retention trait
def: "Leaf retention (stay green)" [CO:curators]
synonym: "LfRet" EXACT []
synonym: "Stay green, Leaf Retention - Cassavabase" EXACT []
is_a: TO:0000077 ! shoot system morphology trait
[Term]
id: CO_334:0000397
name: cassava leaf scar distance trait
def: "Distance between leaf scar" [CO:curators]
synonym: "lfscdist" EXACT []
is_a: TO:0000361 ! stem morphology trait
[Term]
id: CO_334:0000398
name: cassava leaf scar height trait
def: "Height from ground to leaf scar." [CO:curators]
synonym: "ScarHt" EXACT []
is_a: TO:0000361 ! stem morphology trait
[Term]
id: CO_334:0000399
name: cassava leaf scar number trait
def: "Number of leaf scars" [CO:curators]
synonym: "lfscno" EXACT []
is_a: TO:0000361 ! stem morphology trait
[Term]
id: CO_334:0000400
name: cassava leaf scar prominence trait
def: "Prominence of fresh leaf scars" [CO:curators]
synonym: "lfscar" EXACT []
is_a: TO:0000361 ! stem morphology trait
[Term]
id: CO_334:0000401
name: cassava leaf vein color trait
def: "Color of leaf vein" [CO:curators]
synonym: "lfvnco" EXACT []
is_a: TO:0000719 ! leaf vein color
[Term]
id: CO_334:0000402
name: cassava leaf weight trait
def: "Weight of leaf" [CO:curators]
synonym: "LfWt" EXACT []
is_a: TO:0000505 ! leaf weight
[Term]
id: CO_334:0000403
name: cassava male flower number trait
def: "Number of male flowers after the buds appear" [CO:curators]
synonym: "flwmno" EXACT []
is_a: TO:0000986 ! staminate flower number trait
[Term]
id: CO_334:0000404
name: cassava male sterile trait
def: "Cassava plants that do no produce viable pollen." [CO:curators]
synonym: "ms" EXACT []
is_a: TO:0000437 ! male sterility
[Term]
id: CO_334:0000405
name: cassava marketable root number trait
def: "Number of big or more than 1kg root size" [CO:curators]
synonym: "mktrtno" EXACT []
is_a: TO:0001041 ! root yield
[Term]
id: CO_334:0000406
name: cassava marketable root weight trait
def: "Marketable root weight" [CO:curators]
synonym: "MkRtWt" EXACT []
is_a: TO:0001041 ! root yield
[Term]
id: CO_334:0000407
name: cassava moisture content trait
def: "Storage root moisture content" [CO:curators]
synonym: "mc" EXACT []
is_a: TO:0000228 ! moisture content trait
[Term]
id: CO_334:0000408
name: cassava non marketable root number trait
def: "Number of small or less than 1kg root size" [CO:curators]
synonym: "nmkrtno" EXACT []
is_a: TO:0001042 ! root quality trait
[Term]
id: CO_334:0000409
name: cassava non marketable root weight trait
def: "Weight of non-marketable root- i.e., small sized root" [CO:curators]
synonym: "NMkRtWt" EXACT []
is_a: TO:0001042 ! root quality trait
[Term]
id: CO_334:0000410
name: cassava number of bemesia tabaci adult
def: "Number of Bemesia tabaci adult white flies" [CO:curators]
synonym: "BTAdtNo" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000411
name: cassava number of bemesia tabaci nymphs
def: "Number of Bemesia tabaci nymphs white flies" [CO:curators]
synonym: "BTNyNo" EXACT []
is_a: TO:0000261 ! insect damage response trait
[Term]
id: CO_334:0000412
name: cassava number of flowering stalks trait
def: "Number of stalks carrying buds" [CO:curators]
synonym: "FlwStlkNo" EXACT []
is_a: TO:0000077 ! shoot system morphology trait
[Term]
id: CO_334:0000413
name: cassava number of forks trait
def: "Number of branches" [CO:curators]
synonym: "flwfrk" EXACT []
is_a: TO:0002639 ! shoot branching
[Term]
id: CO_334:0000414
name: cassava number of fruits trait
def: "Number of fruits" [CO:curators]
synonym: "fruitno" EXACT []
is_a: TO:0000894 ! fruit number trait
[Term]
id: CO_334:0000415
name: cassava number of fruitset trait
def: "Number of fruits formed after pollination" [CO:curators]
synonym: "flwfrt" EXACT []
is_a: TO:0000852 ! fruit set trait
[Term]
id: CO_334:0000417
name: cassava number of rotten stem trait
def: "Number of rotten stem" [CO:curators]
synonym: "RotStmNo" EXACT []
is_a: TO:0000597 ! plant quality trait
[Term]
id: CO_334:0000419
name: cassava number of stakes
def: "Number of plantable stakes" [CO:curators]
synonym: "Plantable stem number" EXACT []
synonym: "stkno" EXACT []
is_a: TO:0000953 ! stem number
[Term]
id: CO_334:0000420
name: cassava number of terminal branches with inflorescence trait
def: "Number of terminal branches with inflorescence" [CO:curators]
synonym: "TermBrnchNo" EXACT []
is_a: TO:0000582 ! inflorescence number
[Term]
id: CO_334:0000421
name: cassava ovary color trait
def: "Color of ovary" [CO:curators]
synonym: "ovryco" EXACT []
is_a: TO:1000016 ! plant ovary color
[Term]
id: CO_334:0000422
name: cassava peel weight trait
def: "Peel weight" [CO:curators]
synonym: "peelwt" EXACT []
is_a: TO:0001068 ! processing quality trait
[Term]
id: CO_334:0000424
name: cassava root dry matter content trait
def: "Dry matter content of root related terms." [CO:curators]
synonym: "RtDMC" EXACT []
is_a: TO:0001041 ! root yield
[Term]
id: CO_334:0000425
name: cassava total leaf area trait
def: "Measurement of leaf area." [CO:curator]
created_by: AAfolabi
creation_date: 2017-07-18T15:29:42Z
is_a: TO:0000540 ! leaf area trait
[Term]
id: CO_334:0000427
name: cassava petiole color trait
def: "Petiole color" [CO:curators]
synonym: "petcol" EXACT []
is_a: TO:0002707 ! petiole color
[Term]
id: CO_334:0000428
name: cassava petiole insertion angle trait
def: "Angle between branch and petiole" [CO:curators]
synonym: "petang" EXACT []
is_a: TO:0000765 ! petiole morphology trait
[Term]
id: CO_334:0000429
name: cassava petiole length trait
def: "petiole length" [CO:curators]
synonym: "PetLng" EXACT []
is_a: TO:0000766 ! petiole length
[Term]
id: CO_334:0000430
name: cassava petiole orientation trait
def: "petiole orientation" [CO:curators]
synonym: "PetOrt" EXACT []
is_a: TO:0000765 ! petiole morphology trait
[Term]
id: CO_334:0000431
name: cassava plant architecture trait
def: "Plant architecture" [CO:curators]
synonym: "Plant Architecture - Cassavabase" EXACT []
synonym: "PlntArch" EXACT []
is_a: TO:0000398 ! whole plant morphology trait
[Term]
id: CO_334:0000432
name: cassava plant height trait
def: "Height of plant at harvest from ground level to top of canopy" [CO:curators]
synonym: "pltht" EXACT []
is_a: TO:0000207 ! plant height
[Term]
id: CO_334:0000433
name: cassava plant shape trait
def: "Shape of plant" [CO:curators]
synonym: "pltshp" EXACT []
is_a: TO:0000398 ! whole plant morphology trait
[Term]
id: CO_334:0000435
name: cassava plantable stem length trait
def: "Plantable stem length" [CO:curators]
synonym: "PlStmHt" EXACT []
is_a: TO:0000576 ! stem length
[Term]
id: CO_334:0000436
name: cassava ploidy trait
def: "Ploidy level (n = 1,2,3,4 ) (by morphological characteristics)" [CO:curators]
synonym: "ploidy" EXACT []
is_a: TO:0000392 ! sterility or fertility trait
[Term]
id: CO_334:0000437
name: cassava poundability trait
def: "Poundability (mealiness of boiled roots)" [CO:curators]
synonym: "mealiness" EXACT []
synonym: "pd" EXACT []
is_a: TO:0001068 ! processing quality trait
[Term]
id: CO_334:0000438
name: cassava presence of pollen trait
def: "Presence of pollen" [CO:curators]
synonym: "pollen" EXACT []
is_a: TO:0000420 ! fertility related trait
[Term]
id: CO_334:0000439
name: cassava proportion of female flower trait
def: "Proportion of female flower" [CO:curators]
synonym: "FFlwProp" EXACT []
is_a: TO:0000987 ! pistillate flower number trait
[Term]
id: CO_334:0000440
name: cassava proportion of lodged plants trait
def: "Proportion of lodged plants (>45deg)" [CO:curators]
synonym: "lodplt" EXACT []
is_a: TO:0000068 ! lodging incidence
[Term]
id: CO_334:0000441
name: cassava proportion of plant with inflorescence trait
def: "Proportion of plants per plot that have an inflorescence at varying growth stages. Plant with pollinated and unpollinated flowers are all counted together" [CO:curators]
synonym: "pnoinf" EXACT []
is_a: TO:0000582 ! inflorescence number
[Term]
id: CO_334:0000442
name: cassava protein content trait
def: "Protein content" [CO:curators]
synonym: "protei" EXACT []
is_a: TO:0000598 ! protein content
[Term]
id: CO_334:0000443
name: cassava red spider mite incidence trait
def: "Proportion of plants within a plot showing evidence of colonization by red spider mite." [CO:curators]
synonym: "rsmi" EXACT []
is_a: TO:0020121 ! arachnid damage response trait
[Term]
id: CO_334:0000444
name: cassava red spider mite severity trait
def: "Red spider mite severity" [CO:curators]
synonym: "RSMSev" EXACT []
is_a: TO:0020121 ! arachnid damage response trait
[Term]
id: CO_334:0000446
name: cassava root constrictions number trait
def: "Number of constrictions on the storage root" [CO:curators]
synonym: "RtConsNo" EXACT []
synonym: "Tuberous root constriction presence" EXACT []
is_a: TO:1000007 ! tuberous root tuber morphology trait
[Term]
id: CO_334:0000447
name: cassava root dry matter content trait
def: "Dry matter content of storage roots" [CO:curators]
synonym: "dm" EXACT []
is_a: TO:0001041 ! root yield
[Term]
id: CO_334:0000448
name: cassava root evaluation trait
def: "Evaluation of various root properties" [CO:curators]
synonym: "rteval" EXACT []
is_a: TO:0001042 ! root quality trait
[Term]
id: CO_334:0000449
name: cassava days to branching trait
def: "Days to forking event." [AAfolabi]
created_by: AAfolabi
creation_date: 2017-07-25T09:29:55Z
is_a: TO:0000933 ! plant phenological trait
[Term]
id: CO_334:0000450
name: cassava root length trait
def: "Root length" [CO:curators]
synonym: "RtLng" EXACT []
is_a: TO:0000227 ! root length
[Term]
id: CO_334:0000451
name: cassava root neck length trait
def: "Root neck length" [CO:curators]
synonym: "nklgt" EXACT []
is_a: TO:1000007 ! tuberous root tuber morphology trait
[Term]
id: CO_334:0000452
name: cassava root number trait
def: "Number of harvested marketable storage roots" [CO:curators]
synonym: "Marketable root number, Root Number - Cassavabase" EXACT []
synonym: "RtNo" EXACT []
is_a: TO:0001041 ! root yield
[Term]
id: CO_334:0000453
name: cassava root position trait
def: "Position of roots" [CO:curators]
synonym: "rtpost" EXACT []