From bb6fe23bed80abb1bba3710e4ad552271c5a91b5 Mon Sep 17 00:00:00 2001 From: Gabe Fierro Date: Sat, 17 Jun 2023 14:38:37 -0600 Subject: [PATCH 1/5] Make dependencies easier to manage for development: - the "extra" dependencies were not actually marked as optional, so they were all being installed anyway. This make sure they are not installed unless the developer wants them to - "psycopg2" can be difficult to install on some systems like MacOS due to needing to tell the installation process about the location of the libpq library. Now, the much easier "psycopg2-binary" package will be installed as part of the development dependencies. To use postgres in production, one will need to install buildingMOTIF with the "postgres" option/flag which will install the "psycopg2" library which is recommended over "psycopg2-binary" for production. --- pyproject.toml | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index b45c5f782..6034dbf2d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -31,16 +31,16 @@ pyshacl = "^0.21.0" alembic = "^1.8.0" Flask = "^2.1.2" Flask-API = "^3.0.post1" -BAC0 = "^22.9.21" +BAC0 = {version="^22.9.21", optional=true} rfc3987 = "^1.3.8" openpyxl = "^3.0.10" setuptools = "^65.6.3" -netifaces = "^0.11.0" -psycopg2 = "^2.9.5" +netifaces = {version="^0.11.0", optional=true} +psycopg2 = {version="^2.9.5", optional=true} pygit2 = "^1.11.1" jsonschema = "^4.17.3" types-jsonschema = "^4.17.0.6" -pytz = "^2022.7.1" +pytz = {version="^2022.7.1", optional=true} [tool.poetry.group.dev.dependencies] black = "^22.3.0" @@ -49,6 +49,7 @@ pre-commit = "^2.17.0" pytest-cov = "^3.0.0" mypy = "^0.931" sqlalchemy2-stubs = "^0.0.2-alpha.20" +psycopg2-binary = "^2.9.5" jupytext = "^1.13.8" jupyter = "^1.0.0" ipykernel = "^6.13.0" @@ -57,9 +58,11 @@ jupyter-book = "^0.13.1" flake8 = "^5.0.0" [tool.poetry.extras] +postgres = ["psycopg2"] bacnet-ingress = ["BAC0", "netifaces", "pytz"] xlsx-ingress = ["openpyxl"] all-ingresses = ["BAC0", "openpyxl", "netifaces", "pytz"] +all = ["BAC0", "openpyxl", "netifaces", "pytz", "psycopg2"] [build-system] requires = ["poetry-core>=1.0.0"] From 959dd30f05d6760735071d8a2165437aa1368841 Mon Sep 17 00:00:00 2001 From: Gabe Fierro Date: Sat, 17 Jun 2023 14:48:58 -0600 Subject: [PATCH 2/5] add documentation on using postgres in development vs production --- docs/reference/developer_documentation.md | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/docs/reference/developer_documentation.md b/docs/reference/developer_documentation.md index b8d9a0b06..d058aff09 100644 --- a/docs/reference/developer_documentation.md +++ b/docs/reference/developer_documentation.md @@ -15,7 +15,7 @@ ``` 5. Install dependencies and pre-commit. ``` - poetry install + poetry install --with dev # includes development dependencies poetry run pre-commit install ``` @@ -43,6 +43,14 @@ poetry run python buildingmotif/api/app.py ``` API will run on localhost:5000 +### Using Postgres + +**In Development**: While we find SQLite much easier to use for development, there are reasons to use Postgres as the backend database for BuildingMOTIF during development. +We recommend use of the `psycopg2-binary` package for interacting with Postgres for development. *This will be installed automatically as part of installing development dependencies. Make sure you use `poetry install --with dev`*. + +**In Prodution**: To use Postgres as the backend database in a production deployment, we recommend installation of BuildingMOTIF with the `postgres` feature (`pip install BuildingMOTIF[postgres]`). +This will install the `psycopg2` library which is [recommended over `psycopg2-binary` for production settings](https://pypi.org/project/psycopg2-binary/). + ## Continuous Integration The CI process for developers' local clones and the remote repository should be the same for reproduceability, i.e. the commands in the following files should be the same (with *slight* differences). From 00aa87aa934d3334ca903621500fde2ce2dcbe95 Mon Sep 17 00:00:00 2001 From: Gabe Fierro Date: Sat, 17 Jun 2023 14:50:52 -0600 Subject: [PATCH 3/5] Make sure ingress deps are included in 'dev' group --- poetry.lock | 872 +++++++++++++++++++++++++++---------------------- pyproject.toml | 11 +- 2 files changed, 491 insertions(+), 392 deletions(-) diff --git a/poetry.lock b/poetry.lock index 4d2b670fd..02dad0d1e 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry and should not be changed by hand. +# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. [[package]] name = "alabaster" @@ -14,14 +14,14 @@ files = [ [[package]] name = "alembic" -version = "1.10.4" +version = "1.11.1" description = "A database migration tool for SQLAlchemy." category = "main" optional = false python-versions = ">=3.7" files = [ - {file = "alembic-1.10.4-py3-none-any.whl", hash = "sha256:43942c3d4bf2620c466b91c0f4fca136fe51ae972394a0cc8b90810d664e4f5c"}, - {file = "alembic-1.10.4.tar.gz", hash = "sha256:295b54bbb92c4008ab6a7dcd1e227e668416d6f84b98b3c4446a2bc6214a556b"}, + {file = "alembic-1.11.1-py3-none-any.whl", hash = "sha256:dc871798a601fab38332e38d6ddb38d5e734f60034baeb8e2db5b642fccd8ab8"}, + {file = "alembic-1.11.1.tar.gz", hash = "sha256:6a810a6b012c88b33458fceb869aef09ac75d6ace5291915ba7fae44de372c01"}, ] [package.dependencies] @@ -36,24 +36,25 @@ tz = ["python-dateutil"] [[package]] name = "anyio" -version = "3.6.2" +version = "3.7.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" category = 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optional = false python-versions = ">=3.8" files = [ - {file = "Werkzeug-2.3.3-py3-none-any.whl", hash = "sha256:4866679a0722de00796a74086238bb3b98d90f423f05de039abb09315487254a"}, - {file = "Werkzeug-2.3.3.tar.gz", hash = "sha256:a987caf1092edc7523edb139edb20c70571c4a8d5eed02e0b547b4739174d091"}, + {file = "Werkzeug-2.3.6-py3-none-any.whl", hash = "sha256:935539fa1413afbb9195b24880778422ed620c0fc09670945185cce4d91a8890"}, + {file = "Werkzeug-2.3.6.tar.gz", hash = "sha256:98c774df2f91b05550078891dee5f0eb0cb797a522c757a2452b9cee5b202330"}, ] [package.dependencies] @@ -4225,11 +4321,13 @@ docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"] [extras] -all-ingresses = ["BAC0", "openpyxl", "netifaces", "pytz"] -bacnet-ingress = ["BAC0", "netifaces", "pytz"] -xlsx-ingress = ["openpyxl"] +all = ["psycopg2"] +all-ingresses = [] +bacnet-ingress = [] +postgres = ["psycopg2"] +xlsx-ingress = [] [metadata] lock-version = "2.0" python-versions = "^3.8" -content-hash = "be57a2a1b5613ade39eb641f93c9dde802bdd4574508fc3c0292af3a445ad985" +content-hash = "7c3f8d884c24a1479f926c164ec0824b06ab14b0d18c044f0723d17ecb66c687" diff --git a/pyproject.toml b/pyproject.toml index 6034dbf2d..3172c04f5 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -31,16 +31,12 @@ pyshacl = "^0.21.0" alembic = "^1.8.0" Flask = "^2.1.2" Flask-API = "^3.0.post1" -BAC0 = {version="^22.9.21", optional=true} rfc3987 = "^1.3.8" -openpyxl = "^3.0.10" setuptools = "^65.6.3" -netifaces = {version="^0.11.0", optional=true} psycopg2 = {version="^2.9.5", optional=true} pygit2 = "^1.11.1" jsonschema = "^4.17.3" types-jsonschema = "^4.17.0.6" -pytz = {version="^2022.7.1", optional=true} [tool.poetry.group.dev.dependencies] black = "^22.3.0" @@ -56,13 +52,18 @@ ipykernel = "^6.13.0" rise = "^5.7.1" jupyter-book = "^0.13.1" flake8 = "^5.0.0" +BAC0 = "^22.9.21" +netifaces = "^0.11.0" +pytz = "^2022.7.1" +openpyxl = "^3.0.10" [tool.poetry.extras] +all = ["BAC0", "openpyxl", "netifaces", "pytz", "psycopg2"] postgres = ["psycopg2"] +# dependencies for ingresses (e.g. BAC0, openpyxl) should be included in dev dependencies bacnet-ingress = ["BAC0", "netifaces", "pytz"] xlsx-ingress = ["openpyxl"] all-ingresses = ["BAC0", "openpyxl", "netifaces", "pytz"] -all = ["BAC0", "openpyxl", "netifaces", "pytz", "psycopg2"] [build-system] requires = ["poetry-core>=1.0.0"] From 2889de96cdee002530a503a63399a8f0aaf41ae9 Mon Sep 17 00:00:00 2001 From: Gabe Fierro Date: Thu, 29 Jun 2023 13:30:29 -0600 Subject: [PATCH 4/5] Update docs/reference/developer_documentation.md Co-authored-by: Tobias Shapinsky --- docs/reference/developer_documentation.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/reference/developer_documentation.md b/docs/reference/developer_documentation.md index d058aff09..21ecefef4 100644 --- a/docs/reference/developer_documentation.md +++ b/docs/reference/developer_documentation.md @@ -48,7 +48,7 @@ API will run on localhost:5000 **In Development**: While we find SQLite much easier to use for development, there are reasons to use Postgres as the backend database for BuildingMOTIF during development. We recommend use of the `psycopg2-binary` package for interacting with Postgres for development. *This will be installed automatically as part of installing development dependencies. Make sure you use `poetry install --with dev`*. -**In Prodution**: To use Postgres as the backend database in a production deployment, we recommend installation of BuildingMOTIF with the `postgres` feature (`pip install BuildingMOTIF[postgres]`). +**In Production**: To use Postgres as the backend database in a production deployment, we recommend installation of BuildingMOTIF with the `postgres` feature (`pip install BuildingMOTIF[postgres]`). This will install the `psycopg2` library which is [recommended over `psycopg2-binary` for production settings](https://pypi.org/project/psycopg2-binary/). ## Continuous Integration From 35b5d0678c529e7f47b5099cadd689d35f3423ad Mon Sep 17 00:00:00 2001 From: Gabe Fierro Date: Thu, 29 Jun 2023 13:42:24 -0600 Subject: [PATCH 5/5] Update developer_documentation.md --- docs/reference/developer_documentation.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/reference/developer_documentation.md b/docs/reference/developer_documentation.md index 21ecefef4..c1c6d1d30 100644 --- a/docs/reference/developer_documentation.md +++ b/docs/reference/developer_documentation.md @@ -49,7 +49,7 @@ API will run on localhost:5000 We recommend use of the `psycopg2-binary` package for interacting with Postgres for development. *This will be installed automatically as part of installing development dependencies. Make sure you use `poetry install --with dev`*. **In Production**: To use Postgres as the backend database in a production deployment, we recommend installation of BuildingMOTIF with the `postgres` feature (`pip install BuildingMOTIF[postgres]`). -This will install the `psycopg2` library which is [recommended over `psycopg2-binary` for production settings](https://pypi.org/project/psycopg2-binary/). +This will install the `psycopg2` library which is [recommended over `psycopg2-binary` for production settings](https://pypi.org/project/psycopg2-binary/). If you are using BuildingMOTIF as a dependency in another project, make sure to include the `postgres` feature; for example, to add BuildingMOTIF to a [Poetry-based](https://python-poetry.org) project, use `poetry add BuildingMOTIF[postgres]`. ## Continuous Integration