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fv_nggps_diag.F90
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!***********************************************************************
!* GNU Lesser General Public License
!*
!* This file is part of the FV3 dynamical core.
!*
!* The FV3 dynamical core is free software: you can redistribute it
!* and/or modify it under the terms of the
!* GNU Lesser General Public License as published by the
!* Free Software Foundation, either version 3 of the License, or
!* (at your option) any later version.
!*
!* The FV3 dynamical core is distributed in the hope that it will be
!* useful, but WITHOUT ANYWARRANTY; without even the implied warranty
!* of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
!* See the GNU General Public License for more details.
!*
!* You should have received a copy of the GNU Lesser General Public
!* License along with the FV3 dynamical core.
!* If not, see <http://www.gnu.org/licenses/>.
!***********************************************************************
!>@brief The module 'fv_nggps_diags' computes output diagnostics entirely
!! on 3D pressure levels
!>@details The module is designed for applications that process the full
!!3D fields through the NCEP post-processor.
module fv_nggps_diags_mod
! <table>
! <tr>
! <th>Module Name</th>
! <th>Functions Included</th>
! </tr>
! <tr>
! <td>constants_mod</td>
! <td>kappa, grav, rdgas</td>
! </tr>
! <tr>
! <td>diag_manager_mod</td>
! <td>register_diag_field, send_data</td>
! </tr>
! <tr>
! <td>field_manager_mod</td>
! <td>MODEL_ATMOS</td>
! </tr>
! <tr>
! <td>fv_arrays_mod</td>
! <td>fv_atmos_type</td>
! </tr>
! <tr>
! <td>fv_diagnostics_mod</td>
! <td>range_check</td>
! </tr>
! <tr>
! <td>mpp_mod</td>
! <td>mpp_pe, mpp_root_pe</td>
! </tr>
! <tr>
! <td>tracer_manager_mod</td>
! <td>get_tracer_names, get_number_tracers, get_tracer_index</td>
! </tr>
! </table>
use mpp_mod, only: mpp_pe, mpp_root_pe,FATAL,mpp_error
#ifdef OVERLOAD_R4
use constantsR4_mod, only: grav, rdgas
#else
use constants_mod, only: grav, rdgas
#endif
use time_manager_mod, only: time_type, get_time
use diag_manager_mod, only: register_diag_field, send_data
use diag_axis_mod, only: get_axis_global_length, get_diag_axis, get_diag_axis_name
use diag_data_mod, only: output_fields, max_output_fields
use diag_util_mod, only: find_input_field
use tracer_manager_mod, only: get_tracer_names, get_number_tracers, get_tracer_index
use field_manager_mod, only: MODEL_ATMOS
use fv_diagnostics_mod, only: range_check, dbzcalc,max_vv,get_vorticity, &
max_uh,max_vorticity,bunkers_vector, &
helicity_relative_CAPS,max_vorticity_hy1
use fv_arrays_mod, only: fv_atmos_type
use mpp_domains_mod, only: domain1d, domainUG
#ifdef MULTI_GASES
use multi_gases_mod, only: virq
#endif
implicit none
private
real, parameter:: missing_value = -1.e10
real, parameter:: stndrd_atmos_ps = 101325.
real, parameter:: stndrd_atmos_lapse = 0.0065
logical master
integer :: id_ua, id_va, id_pt, id_delp, id_pfhy, id_pfnh
integer :: id_w, id_delz, id_diss, id_ps, id_hs, id_dbz, id_omga
integer :: kstt_ua, kstt_va, kstt_pt, kstt_delp, kstt_pfhy
integer :: kstt_pfnh, kstt_w, kstt_delz, kstt_diss, kstt_ps,kstt_hs
integer :: kend_ua, kend_va, kend_pt, kend_delp, kend_pfhy
integer :: kend_pfnh, kend_w, kend_delz, kend_diss, kend_ps,kend_hs
integer :: kstt_dbz, kend_dbz, kstt_omga, kend_omga
integer :: kstt_windvect, kend_windvect
integer :: id_wmaxup,id_wmaxdn,kstt_wup, kend_wup,kstt_wdn,kend_wdn
integer :: id_uhmax03,id_uhmin03,id_uhmax25,id_uhmin25,id_maxvort01
integer :: id_maxvorthy1,kstt_maxvorthy1,kstt_maxvort01,id_ustm
integer :: kend_maxvorthy1,kend_maxvort01,id_vstm,id_srh01,id_srh03
integer :: kstt_uhmax03,kstt_uhmin03,kend_uhmax03,kend_uhmin03
integer :: kstt_uhmax25,kstt_uhmin25,kend_uhmax25,kend_uhmin25
integer :: kstt_ustm,kstt_vstm,kend_ustm,kend_vstm,kstt_srh01
integer :: kstt_srh03,kend_srh01,kend_srh03
integer :: id_maxvort02,kstt_maxvort02,kend_maxvort02
integer :: isco, ieco, jsco, jeco, npzo, ncnsto
integer :: isdo, iedo, jsdo, jedo
integer :: nlevs
logical :: hydrostatico
integer, allocatable :: id_tracer(:), all_axes(:)
integer, allocatable :: kstt_tracer(:), kend_tracer(:)
real, allocatable :: ak(:), bk(:)
character(20),allocatable :: axis_name(:),axis_name_vert(:)
logical :: module_is_initialized=.false.
logical :: use_wrtgridcomp_output=.false.
integer :: sphum, liq_wat, ice_wat !< GFDL physics
integer :: rainwat, snowwat, graupel
real :: vrange(2), wrange(2), trange(2)
real :: skrange(2) = (/ -10000000.0, 10000000.0 /) !< dissipation estimate for SKEB
! file name
character(len=64) :: file_name = 'gfs_dyn'
! tracers
character(len=128) :: tname
character(len=256) :: tlongname, tunits
! wrtout buffer
real(4), dimension(:,:,:), allocatable, target :: buffer_dyn
real(4), dimension(:,:,:,:), allocatable, target :: windvect
real(4), dimension(:,:), allocatable, target :: psurf
real, dimension(:,:), allocatable :: lon, lat
real, dimension(:,:),allocatable :: up2,dn2,uhmax03,uhmin03
real, dimension(:,:),allocatable :: uhmax25,uhmin25,maxvort01
real, dimension(:,:),allocatable :: maxvorthy1,maxvort02
public :: fv_nggps_diag_init, fv_nggps_diag, fv_nggps_tavg
#ifdef use_WRTCOMP
public :: fv_dyn_bundle_setup
#endif
contains
subroutine fv_nggps_diag_init(Atm, axes, Time)
type(fv_atmos_type), intent(inout), target :: Atm(:)
integer, intent(in) :: axes(4)
type(time_type), intent(in) :: Time
integer :: n, i, j, nz
n = 1
ncnsto = Atm(1)%ncnst
npzo = Atm(1)%npz
isco = Atm(n)%bd%isc; ieco = Atm(n)%bd%iec
jsco = Atm(n)%bd%jsc; jeco = Atm(n)%bd%jec
isdo = Atm(n)%bd%isd; iedo = Atm(n)%bd%ied
jsdo = Atm(n)%bd%jsd; jedo = Atm(n)%bd%jed
hydrostatico = Atm(n)%flagstruct%hydrostatic
sphum = get_tracer_index (MODEL_ATMOS, 'sphum')
liq_wat = get_tracer_index (MODEL_ATMOS, 'liq_wat')
ice_wat = get_tracer_index (MODEL_ATMOS, 'ice_wat')
rainwat = get_tracer_index (MODEL_ATMOS, 'rainwat')
snowwat = get_tracer_index (MODEL_ATMOS, 'snowwat')
graupel = get_tracer_index (MODEL_ATMOS, 'graupel')
!--------------------------------------------------------------
! Register main prognostic fields: ps, (u,v), t, omega (dp/dt)
!--------------------------------------------------------------
allocate(id_tracer(ncnsto))
allocate(kstt_tracer(ncnsto), kend_tracer(ncnsto))
id_tracer(:) = 0
kstt_tracer(:) = 0
kend_tracer(:) = 0
if ( Atm(n)%flagstruct%molecular_diffusion ) then
vrange = (/ -830., 830. /) !< winds for wam
wrange = (/ -300., 300. /) !< vertical wind for wam
trange = (/ 100., 3000. /) !< temperature for wam
else
vrange = (/ -330., 330. /) !< winds
wrange = (/ -100., 100. /) !< vertical wind
#ifdef MULTI_GASES
trange = (/ 100., 3000. /) !< temperature
#else
trange = (/ 100., 350. /) !< temperature
#endif
endif
if (Atm(n)%flagstruct%write_3d_diags) then
!-------------------
! A grid winds (lat-lon)
!-------------------
id_ua = register_diag_field ( trim(file_name), 'ucomp', axes(1:3), Time, &
'zonal wind', 'm/sec', missing_value=missing_value, range=vrange )
if (id_ua>0) then
kstt_ua = 1; kend_ua = npzo
nlevs = nlevs + npzo
endif
id_va = register_diag_field ( trim(file_name), 'vcomp', axes(1:3), Time, &
'meridional wind', 'm/sec', missing_value=missing_value, range=vrange)
if (id_va>0) then
kstt_va = nlevs+1; kend_va = nlevs+npzo
nlevs = nlevs + npzo
endif
if(id_ua>0 .and. id_va>0) then
kstt_windvect = 1; kend_windvect = npzo
allocate(windvect(3,isco:ieco,jsco:jeco,npzo))
windvect = 0.
endif
if( Atm(n)%flagstruct%hydrostatic ) then
id_pfhy = register_diag_field ( trim(file_name), 'pfhy', axes(1:3), Time, &
'hydrostatic pressure', 'pa', missing_value=missing_value )
if (id_pfhy>0) then
kstt_pfhy = nlevs+1; kend_pfhy = nlevs+npzo
nlevs = nlevs + npzo
endif
else
id_pfnh = register_diag_field ( trim(file_name), 'pfnh', axes(1:3), Time, &
'non-hydrostatic pressure', 'pa', missing_value=missing_value )
if (id_pfnh>0) then
kstt_pfnh = nlevs+1; kend_pfnh = nlevs+npzo
nlevs = nlevs + npzo
endif
id_w = register_diag_field ( trim(file_name), 'w', axes(1:3), Time, &
'vertical wind', 'm/sec', missing_value=missing_value, range=wrange )
if (id_w>0) then
kstt_w = nlevs+1; kend_w = nlevs+npzo
nlevs = nlevs + npzo
endif
id_delz = register_diag_field ( trim(file_name), 'delz', axes(1:3), Time, &
'height thickness', 'm', missing_value=missing_value )
if (id_delz>0) then
kstt_delz = nlevs+1; kend_delz = nlevs+npzo
nlevs = nlevs + npzo
endif
endif
id_omga = register_diag_field ( trim(file_name), 'omga', axes(1:3), Time, &
'Vertical pressure velocity', 'pa/sec', missing_value=missing_value )
if (id_omga>0) then
kstt_omga = nlevs+1; kend_omga = nlevs+npzo
nlevs = nlevs + npzo
endif
id_pt = register_diag_field ( trim(file_name), 'temp', axes(1:3), Time, &
'temperature', 'K', missing_value=missing_value, range=trange )
if (id_pt>0) then
kstt_pt = nlevs+1; kend_pt = nlevs+npzo
nlevs = nlevs + npzo
endif
id_delp = register_diag_field ( trim(file_name), 'delp', axes(1:3), Time, &
'pressure thickness', 'pa', missing_value=missing_value )
if (id_delp>0) then
kstt_delp = nlevs+1; kend_delp = nlevs+npzo
nlevs = nlevs + npzo
endif
!--- diagnostic output for skeb: dissipation estimate
id_diss = register_diag_field ( trim(file_name), 'diss_est', axes(1:3), Time, &
'dissipation estimate', 'none', missing_value=missing_value, range=skrange )
if (id_delp>0) then
kstt_diss = nlevs+1; kend_diss = nlevs+npzo
nlevs = nlevs + npzo
endif
!--------------------
! Tracer diagnostics:
!--------------------
do i=1, ncnsto
call get_tracer_names ( MODEL_ATMOS, i, tname, tlongname, tunits )
id_tracer(i) = register_diag_field ( file_name, trim(tname), &
axes(1:3), Time, trim(tlongname), &
trim(tunits), missing_value=missing_value)
if (id_tracer(i)>0) then
kstt_tracer(i) = nlevs+1; kend_tracer(i) = nlevs+npzo
nlevs = nlevs + npzo
endif
enddo
!
id_ps = register_diag_field ( trim(file_name), 'ps', axes(1:2), Time, &
'surface pressure', 'pa', missing_value=missing_value )
if( id_ps > 0) then
kstt_ps = nlevs+1; kend_ps = nlevs+1
nlevs = nlevs + 1
allocate(psurf(isco:ieco,jsco:jeco))
endif
!
id_hs = register_diag_field ( trim(file_name), 'hs', axes(1:2), Time, &
'surface geopotential height', 'gpm', missing_value=missing_value )
if( id_hs > 0) then
kstt_hs = nlevs+1; kend_hs = nlevs+1
nlevs = nlevs + 1
endif
!
id_dbz = register_diag_field ( trim(file_name), 'reflectivity', axes(1:3), Time, &
'Stoelinga simulated reflectivity', 'dBz', missing_value=missing_value)
if( rainwat > 0 .and. id_dbz > 0) then
kstt_dbz = nlevs+1; kend_dbz = nlevs+npzo
nlevs = nlevs + npzo
endif
id_ustm = register_diag_field ( trim(file_name), 'ustm',axes(1:2), Time, &
'u comp of storm motion', 'm/s', missing_value=missing_value )
if( id_ustm > 0) then
kstt_ustm = nlevs+1; kend_ustm = nlevs+1
nlevs = nlevs + 1
endif
id_vstm = register_diag_field ( trim(file_name), 'vstm',axes(1:2), Time, &
'v comp of storm motion', 'm/s', missing_value=missing_value )
if( id_vstm > 0) then
kstt_vstm = nlevs+1; kend_vstm = nlevs+1
nlevs = nlevs + 1
endif
id_srh01 = register_diag_field ( trim(file_name), 'srh01',axes(1:2), Time, &
'0-1km storm rel. helicity', 'm/s**2', missing_value=missing_value )
if( id_srh01 > 0) then
kstt_srh01 = nlevs+1; kend_srh01 = nlevs+1
nlevs = nlevs + 1
endif
id_srh03 = register_diag_field ( trim(file_name), 'srh03',axes(1:2), Time, &
'0-3km storm rel. helicity', 'm/s**2', missing_value=missing_value )
if( id_srh03 > 0) then
kstt_srh03 = nlevs+1; kend_srh03 = nlevs+1
nlevs = nlevs + 1
endif
id_maxvort01 = register_diag_field ( trim(file_name), 'maxvort01',axes(1:2), Time, &
'Max hourly 0-1km vert vorticity', '1/s', missing_value=missing_value )
if( id_maxvort01 > 0) then
allocate ( maxvort01(isco:ieco,jsco:jeco) )
kstt_maxvort01 = nlevs+1; kend_maxvort01 = nlevs+1
nlevs = nlevs + 1
endif
id_maxvort02 = register_diag_field ( trim(file_name), 'maxvort02',axes(1:2), Time, &
'Max hourly 0-2km vert vorticity', '1/s', missing_value=missing_value )
if( id_maxvort02 > 0) then
allocate ( maxvort02(isco:ieco,jsco:jeco) )
kstt_maxvort02 = nlevs+1; kend_maxvort02 = nlevs+1
nlevs = nlevs + 1
endif
id_maxvorthy1 = register_diag_field ( trim(file_name), 'maxvorthy1',axes(1:2), Time, &
'Max hourly hybrid lev1 vert. vorticity', '1/s', missing_value=missing_value )
if( id_maxvorthy1 > 0) then
allocate ( maxvorthy1(isco:ieco,jsco:jeco) )
kstt_maxvorthy1 = nlevs+1; kend_maxvorthy1 = nlevs+1
nlevs = nlevs + 1
endif
id_wmaxup = register_diag_field ( trim(file_name), 'wmaxup',axes(1:2), Time, &
'Max hourly updraft velocity', 'm/s', missing_value=missing_value )
if( id_wmaxup > 0) then
allocate ( up2(isco:ieco,jsco:jeco) )
kstt_wup = nlevs+1; kend_wup = nlevs+1
nlevs = nlevs + 1
endif
id_wmaxdn = register_diag_field ( trim(file_name), 'wmaxdn',axes(1:2), Time, &
'Max hourly downdraft velocity', 'm/s', missing_value=missing_value )
! write (0,*)'id_wmaxdn in fv_nggps=',id_wmaxdn
if( id_wmaxdn > 0) then
allocate ( dn2(isco:ieco,jsco:jeco) )
kstt_wdn = nlevs+1; kend_wdn = nlevs+1
nlevs = nlevs + 1
endif
id_uhmax03 = register_diag_field ( trim(file_name), 'uhmax03',axes(1:2), Time, &
'Max hourly max 0-3km updraft helicity', 'm/s**2', missing_value=missing_value )
! write (0,*)'id_uhmax03 in fv_nggps=',id_uhmax03
if( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmax03 > 0 ) then
allocate ( uhmax03(isco:ieco,jsco:jeco) )
kstt_uhmax03 = nlevs+1; kend_uhmax03 = nlevs+1
nlevs = nlevs + 1
endif
!
id_uhmin03 = register_diag_field ( trim(file_name), 'uhmin03',axes(1:2), Time, &
'Max hourly min 0-3km updraft helicity', 'm/s**2', missing_value=missing_value )
if( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmin03 > 0 ) then
allocate ( uhmin03(isco:ieco,jsco:jeco) )
kstt_uhmin03 = nlevs+1; kend_uhmin03 = nlevs+1
nlevs = nlevs + 1
endif
!
id_uhmax25 = register_diag_field ( trim(file_name), 'uhmax25',axes(1:2), Time, &
'Max hourly max 2-5km updraft helicity', 'm/s**2', missing_value=missing_value )
if( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmax25 > 0 ) then
allocate ( uhmax25(isco:ieco,jsco:jeco) )
kstt_uhmax25 = nlevs+1; kend_uhmax25 = nlevs+1
nlevs = nlevs + 1
endif
!
id_uhmin25 = register_diag_field ( trim(file_name), 'uhmin25',axes(1:2), Time, &
'Max hourly min 2-5km updraft helicity', 'm/s**2', missing_value=missing_value )
if( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmin25 > 0 ) then
allocate ( uhmin25(isco:ieco,jsco:jeco) )
kstt_uhmin25 = nlevs+1; kend_uhmin25 = nlevs+1
nlevs = nlevs + 1
endif
!
nz = size(atm(1)%ak)
allocate(ak(nz))
allocate(bk(nz))
do i=1,nz
ak(i) = atm(1)%ak(i)
bk(i) = atm(1)%bk(i)
enddo
! print *,'in ngpps diag init, ak=',ak(1:5),' bk=',bk(1:5)
! get lon,lat information
if(.not.allocated(lon)) then
allocate(lon(isco:ieco,jsco:jeco))
do j=jsco,jeco
do i=isco,ieco
lon(i,j) = Atm(n)%gridstruct%agrid(i,j,1)
enddo
enddo
! if(mpp_pe()==mpp_root_pe())print *,'in fv_dyn bundle,lon=',lon(isco,jsco),lon(ieco-2:ieco,jeco-2:jeco)*180./3.14157
endif
if(.not.allocated(lat)) then
allocate(lat(isco:ieco,jsco:jeco))
do j=jsco,jeco
do i=isco,ieco
lat(i,j) = Atm(n)%gridstruct%agrid(i,j,2)
enddo
enddo
! if(mpp_pe()==mpp_root_pe())print *,'in fv_dyn bundle,lat=',lat(isco,jsco),lat(ieco-2:ieco,jeco-2:jeco)*180./3.14157
endif
endif
!
!------------------------------------
! use wrte grid component for output
!------------------------------------
use_wrtgridcomp_output = .false.
end subroutine fv_nggps_diag_init
subroutine fv_nggps_diag(Atm, zvir, Time)
type(fv_atmos_type), intent(inout) :: Atm(:)
real, intent(in):: zvir
type(time_type), intent(in) :: Time
integer :: i, j, k, n, ngc, nq, itrac
logical :: bad_range
real :: ptop, allmax
real, allocatable :: wk(:,:,:), wk2(:,:,:)
real, dimension(:,:),allocatable :: ustm,vstm,srh01,srh03
n = 1
ngc = Atm(n)%ng
ptop = Atm(n)%ak(1)
allmax = -20.
nq = size (Atm(n)%q,4)
allocate ( wk(isco:ieco,jsco:jeco,npzo) )
allocate ( wk2(isco:ieco,jsco:jeco,npzo) )
allocate ( ustm(isco:ieco,jsco:jeco) )
allocate ( vstm(isco:ieco,jsco:jeco) )
allocate ( srh01(isco:ieco,jsco:jeco) )
allocate ( srh03(isco:ieco,jsco:jeco) )
if ( Atm(n)%flagstruct%range_warn ) then
call range_check('DELP', Atm(n)%delp, isco, ieco, jsco, jeco, ngc, npzo, Atm(n)%gridstruct%agrid, &
0.01*ptop, 200.E2, bad_range)
call range_check('UA', Atm(n)%ua, isco, ieco, jsco, jeco, ngc, npzo, Atm(n)%gridstruct%agrid, &
-250., 250., bad_range)
call range_check('VA', Atm(n)%va, isco, ieco, jsco, jeco, ngc, npzo, Atm(n)%gridstruct%agrid, &
-250., 250., bad_range)
call range_check('TA', Atm(n)%pt, isco, ieco, jsco, jeco, ngc, npzo, Atm(n)%gridstruct%agrid, &
150., 350., bad_range) !DCMIP ICs have very low temperatures
endif
!--- A-GRID WINDS
if ( .not. allocated(buffer_dyn)) allocate(buffer_dyn(isco:ieco,jsco:jeco,nlevs))
if(id_ua > 0) call store_data(id_ua, Atm(n)%ua(isco:ieco,jsco:jeco,:), Time, kstt_ua, kend_ua)
if(id_va > 0) call store_data(id_va, Atm(n)%va(isco:ieco,jsco:jeco,:), Time, kstt_va, kend_va)
!--- set up 3D wind vector
if(id_ua>0 .and. id_va>0) then
do k=1,npzo
do j=jsco,jeco
do i=isco,ieco
windvect(1,i,j,k) = Atm(n)%ua(i,j,k)*cos(lon(i,j)) - Atm(n)%va(i,j,k)*sin(lat(i,j))*sin(lon(i,j))
windvect(2,i,j,k) = Atm(n)%ua(i,j,k)*sin(lon(i,j)) + Atm(n)%va(i,j,k)*sin(lat(i,j))*cos(lon(i,j))
windvect(3,i,j,k) = Atm(n)%va(i,j,k)*cos(lat(i,j))
enddo
enddo
enddo
endif
!--- W (non-hydrostatic)
if ( .not.Atm(n)%flagstruct%hydrostatic .and. id_w>0 ) then
call store_data(id_w, Atm(n)%w(isco:ieco,jsco:jeco,:), Time, kstt_w, kend_w)
endif
!--- OMGA (non-hydrostatic)
if ( id_omga>0 ) then
call store_data(id_omga, Atm(n)%omga(isco:ieco,jsco:jeco,:), Time, kstt_omga, kend_omga)
endif
!--- TEMPERATURE
if(id_pt > 0) call store_data(id_pt, Atm(n)%pt(isco:ieco,jsco:jeco,:), Time, kstt_pt, kend_pt)
!--- TRACERS
do itrac=1, ncnsto
call get_tracer_names (MODEL_ATMOS, itrac, tname)
if (id_tracer(itrac) > 0 .and. itrac.gt.nq) then
call store_data (id_tracer(itrac), Atm(n)%qdiag(isco:ieco,jsco:jeco,:,itrac), Time, &
kstt_tracer(itrac),kend_tracer(itrac) )
else
call store_data (id_tracer(itrac), Atm(n)%q(isco:ieco,jsco:jeco,:,itrac), Time, &
kstt_tracer(itrac),kend_tracer(itrac) )
endif
enddo
!--- DELZ (non-hydrostatic)
if((.not. Atm(n)%flagstruct%hydrostatic) .and. id_delz > 0) then
do k=1,npzo
do j=jsco,jeco
do i=isco,ieco
wk(i,j,k) = Atm(n)%delz(i,j,k)
enddo
enddo
enddo
call store_data(id_delz, wk, Time, kstt_delz, kend_delz)
endif
!--- PRESSURE (hydrostatic)
if( Atm(n)%flagstruct%hydrostatic .and. id_pfhy > 0 ) then
do k=1,npzo
do j=jsco,jeco
do i=isco,ieco
wk(i,j,k) = 0.5 *(Atm(n)%pe(i,k,j)+Atm(n)%pe(i,k+1,j))
enddo
enddo
enddo
call store_data(id_pfhy, wk, Time, kstt_pfhy, kend_pfhy)
endif
#ifdef GFS_PHYS
!--- DELP
if(id_delp > 0 .or. ((.not. Atm(n)%flagstruct%hydrostatic) .and. id_pfnh > 0)) then
do k=1,npzo
do j=jsco,jeco
do i=isco,ieco
wk(i,j,k) = Atm(n)%delp(i,j,k)*(1.-sum(Atm(n)%q(i,j,k,2:Atm(n)%flagstruct%nwat)))
enddo
enddo
enddo
call store_data(id_delp, wk, Time, kstt_delp, kend_delp)
endif
!--- Surface Pressure (PS)
! Re-compute pressure (dry_mass + water_vapor) surface pressure
if(id_ps > 0) then
do k=1,npzo
do j=jsco,jeco
do i=isco,ieco
wk(i,j,k) = Atm(n)%delp(i,j,k)*(1.-sum(Atm(n)%q(i,j,k,2:Atm(n)%flagstruct%nwat)))
enddo
enddo
enddo
do j=jsco,jeco
do i=isco,ieco
psurf(i,j) = ptop
do k=npzo,1,-1
psurf(i,j) = psurf(i,j) + wk(i,j,k)
enddo
enddo
enddo
endif
!--- PRESSURE (non-hydrostatic)
if( (.not. Atm(n)%flagstruct%hydrostatic) .and. id_pfnh > 0) then
do k=1,npzo
do j=jsco,jeco
do i=isco,ieco
wk(i,j,k) = -wk(i,j,k)/(Atm(n)%delz(i,j,k)*grav)*rdgas*Atm(n)%pt(i,j,k)
#ifdef MULTI_GASES
wk(i,j,k) = wk(i,j,k) * virq(Atm(n)%q(i,j,k,:))
#else
wk(i,j,k) = wk(i,j,k) * (1.+zvir*Atm(n)%q(i,j,k,sphum))
#endif
enddo
enddo
enddo
call store_data(id_pfnh, wk, Time, kstt_pfnh, kend_pfnh)
endif
#else
!--- DELP
if(id_delp > 0) call store_data(id_delp, Atm(n)%delp(isco:ieco,jsco:jeco,:), Time, kstt_delp, kend_delp)
!--- Surface Pressure (PS)
if( id_ps > 0) then
do j=jsco,jeco
do i=isco,ieco
psurf(i,j) = Atm(n)%ps(i,j)
enddo
enddo
endif
!--- PRESSURE (non-hydrostatic)
if( (.not. Atm(n)%flagstruct%hydrostatic) .and. id_pfnh > 0) then
do k=1,npzo
do j=jsco,jeco
do i=isco,ieco
wk(i,j,k) = -Atm(n)%delp(i,j,k)/(Atm(n)%delz(i,j,k)*grav)*rdgas*Atm(n)%pt(i,j,k)
#ifdef MULTI_GASES
wk(i,j,k) = wk(i,j,k)*virq(Atm(n)%q(i,j,k,:)
#else
wk(i,j,k) = wk(i,j,k)*(1.+zvir*Atm(n)%q(i,j,k,sphum))
#endif
enddo
enddo
enddo
call store_data(id_pfnh, wk, Time, kstt_pfnh, kend_pfnh)
endif
#endif
!--- DISS_EST (skeb: dissipation estimate)
if(id_diss > 0) call store_data(id_diss, Atm(n)%diss_est(isco:ieco,jsco:jeco,:), Time, kstt_diss, kend_diss)
!
if(id_ps > 0) then
if( use_wrtgridcomp_output ) then
do j=jsco,jeco
do i=isco,ieco
wk(i,j,1) = (psurf(i,j)/stndrd_atmos_ps)**(rdgas/grav*stndrd_atmos_lapse)
enddo
enddo
else
do j=jsco,jeco
do i=isco,ieco
wk(i,j,1) = psurf(i,j)
enddo
enddo
endif
! print *,'in comput ps, i=',isco,'j=',jsco,'psurf=',psurf(isco,jsco),'stndrd_atmos_ps=',stndrd_atmos_ps, &
! 'rdgas=',rdgas,'grav=',grav,'stndrd_atmos_lapse=',stndrd_atmos_lapse,rdgas/grav*stndrd_atmos_lapse
call store_data(id_ps, wk, Time, kstt_ps, kend_ps)
endif
if( id_hs > 0) then
do j=jsco,jeco
do i=isco,ieco
wk(i,j,1) = Atm(n)%phis(i,j)/grav
enddo
enddo
call store_data(id_hs, wk, Time, kstt_hs, kend_hs)
endif
!--- 3-D Reflectivity field
if ( rainwat > 0 .and. id_dbz>0) then
call dbzcalc(Atm(n)%q, Atm(n)%pt, Atm(n)%delp, Atm(n)%peln, Atm(n)%delz, &
wk, wk2, allmax, Atm(n)%bd, npzo, Atm(n)%ncnst, Atm(n)%flagstruct%hydrostatic, &
zvir, .false., .false., .false., .true., Atm(n)%flagstruct%do_inline_mp ) ! GFDL MP has constant N_0 intercept
call store_data(id_dbz, wk, Time, kstt_dbz, kend_dbz)
endif
deallocate ( wk )
!---u and v comp of storm motion, 0-1, 0-3km SRH
if ( id_ustm > 0 .or. id_vstm > 0 .or. id_srh01 > 0 .or. id_srh03 > 0) then
if ( id_ustm > 0 .and. id_vstm > 0 .and. id_srh01 > 0 .and. id_srh03 > 0) then
call bunkers_vector(isco,ieco,jsco,jeco,ngc,npzo,zvir,sphum,ustm,vstm, &
Atm(n)%ua,Atm(n)%va, Atm(n)%delz, Atm(n)%q, &
Atm(n)%flagstruct%hydrostatic, Atm(n)%pt, Atm(n)%peln,&
Atm(n)%phis, grav)
call helicity_relative_CAPS(isco,ieco,jsco,jeco,ngc,npzo,zvir,sphum,srh01, &
ustm, vstm,Atm(n)%ua, Atm(n)%va, Atm(n)%delz, &
Atm(n)%q,Atm(n)%flagstruct%hydrostatic, &
Atm(n)%pt, Atm(n)%peln, Atm(n)%phis, grav, 0., 1.e3)
call helicity_relative_CAPS(isco,ieco,jsco,jeco,ngc,npzo,zvir,sphum,srh03, &
ustm, vstm,Atm(n)%ua, Atm(n)%va, Atm(n)%delz, &
Atm(n)%q,Atm(n)%flagstruct%hydrostatic, &
Atm(n)%pt, Atm(n)%peln, Atm(n)%phis, grav, 0., 3.e3)
call store_data(id_ustm, ustm, Time, kstt_ustm, kend_ustm)
call store_data(id_vstm, vstm, Time, kstt_vstm, kend_vstm)
call store_data(id_srh01, srh01, Time, kstt_srh01, kend_srh01)
call store_data(id_srh03, srh03, Time, kstt_srh03, kend_srh03)
else
print *,'Missing fields in diag_table'
print *,'Make sure the following are listed in the diag_table under gfs_dyn:'
print *,'ustm,vstm,srh01,shr03'
call mpp_error(FATAL, 'Missing fields in diag_table')
stop
endif
endif
deallocate ( ustm )
deallocate ( vstm )
deallocate ( srh01 )
deallocate ( srh03 )
!--- max hourly 0-1km vert. vorticity
if ( id_maxvort01 > 0) then
call store_data(id_maxvort01, maxvort01, Time, kstt_maxvort01, kend_maxvort01)
endif
!--- max hourly 0-2km vert. vorticity
if ( id_maxvort02 > 0) then
call store_data(id_maxvort02, maxvort02, Time, kstt_maxvort02, kend_maxvort02)
endif
!--- max hourly hybrid lev 1 vert. vorticity
if ( id_maxvorthy1 > 0) then
call store_data(id_maxvorthy1, maxvorthy1, Time, kstt_maxvorthy1, kend_maxvorthy1)
endif
!
!--- max hourly updraft velocity
if ( id_wmaxup > 0) then
call store_data(id_wmaxup, up2, Time, kstt_wup, kend_wup)
endif
!--- max hourly downdraft velocity
if ( id_wmaxdn > 0) then
call store_data(id_wmaxdn, dn2, Time, kstt_wdn, kend_wdn)
endif
!--- max hourly max 0-3km updraft helicity
if ( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmax03 > 0) then
call store_data(id_uhmax03, uhmax03, Time, kstt_uhmax03, kend_uhmax03)
endif
!
!--- max hourly min 0-3km updraft helicity
if ( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmin03 > 0) then
call store_data(id_uhmin03, uhmin03, Time, kstt_uhmin03, kend_uhmin03)
endif
!
!--- max hourly max 2-5km updraft helicity
if ( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmax25 > 0) then
call store_data(id_uhmax25, uhmax25, Time, kstt_uhmax25, kend_uhmax25)
endif
!
!--- max hourly min 2-5km updraft helicity
if ( .not.Atm(n)%flagstruct%hydrostatic .and. id_uhmin25 > 0) then
call store_data(id_uhmin25, uhmin25, Time, kstt_uhmin25, kend_uhmin25)
endif
end subroutine fv_nggps_diag
subroutine fv_nggps_tavg(Atm, Time_step_atmos,avg_max_length,zvir)
type(fv_atmos_type), intent(inout) :: Atm(:)
type(time_type), intent(in) :: Time_step_atmos
real, intent(in):: zvir
integer :: i, j, k, n, ngc, nq, itrac
integer seconds, days, nsteps_per_reset
logical, save :: first_call=.true.
real, save :: first_time = 0.
integer, save :: kdtt = 0
real :: avg_max_length
real,dimension(:,:,:),allocatable :: vort
n = 1
ngc = Atm(n)%ng
nq = size (Atm(n)%q,4)
!
!Check if any of the max hourly fields are being requested otherwise skip
!
if(id_wmaxup > 0 .or. id_wmaxdn > 0 .or. id_uhmax03 > 0 .or. id_uhmin03 > 0 &
.or. id_uhmax25 > 0 .or. id_uhmin25 > 0 .or. id_maxvort01 > 0 &
.or. id_maxvorthy1 > 0 .or. id_maxvort02 > 0) then
!Make sure the group of max hrly fields listed below are ALL present otherwise
!abort
!
if(id_wmaxup > 0 .and. id_wmaxdn > 0 .and. id_uhmax03 > 0 .and. id_uhmin03 > 0 &
.and. id_uhmax25 > 0 .and. id_uhmin25 > 0 .and. id_maxvort01 > 0 &
.and. id_maxvorthy1 > 0 .and. id_maxvort02 > 0) then
allocate ( vort(isco:ieco,jsco:jeco,npzo) )
if (first_call) then
call get_time (Time_step_atmos, seconds, days)
first_time=seconds
first_call=.false.
kdtt=0
endif
nsteps_per_reset = nint(avg_max_length/first_time)
do j=jsco,jeco
do i=isco,ieco
if(mod(kdtt,nsteps_per_reset)==0)then
up2(i,j) = -999.
dn2(i,j) = 999.
maxvorthy1(i,j)= 0.
maxvort01(i,j)= 0.
maxvort02(i,j)= 0.
endif
enddo
enddo
call get_vorticity(isco,ieco,jsco,jeco,isdo,iedo,jsdo,jedo, &
npzo,Atm(n)%u,Atm(n)%v,vort, &
Atm(n)%gridstruct%dx,Atm(n)%gridstruct%dy,&
Atm(n)%gridstruct%rarea)
call max_vorticity_hy1(isco,ieco,jsco,jeco,npzo,vort,maxvorthy1)
call max_vorticity(isco,ieco,jsco,jeco,ngc,npzo,zvir, &
sphum,Atm(n)%delz,Atm(n)%q, &
Atm(n)%flagstruct%hydrostatic, &
Atm(n)%pt,Atm(n)%peln,Atm(n)%phis,grav, &
vort,maxvort01,0., 1.e3)
call max_vorticity(isco,ieco,jsco,jeco,ngc,npzo,zvir, &
sphum,Atm(n)%delz,Atm(n)%q, &
Atm(n)%flagstruct%hydrostatic, &
Atm(n)%pt,Atm(n)%peln,Atm(n)%phis,grav, &
vort,maxvort02,0., 2.e3)
if( .not.Atm(n)%flagstruct%hydrostatic ) then
call max_vv(isco,ieco,jsco,jeco,npzo,ngc,up2,dn2,Atm(n)%pe,Atm(n)%w)
do j=jsco,jeco
do i=isco,ieco
if(mod(kdtt,nsteps_per_reset)==0)then
uhmax03(i,j)= 0.
uhmin03(i,j)= 0.
uhmax25(i,j)= 0.
uhmin25(i,j)= 0.
endif
enddo
enddo
call max_uh(isco,ieco,jsco,jeco,ngc,npzo,zvir, &
sphum,uhmax03,uhmin03,Atm(n)%w,vort,Atm(n)%delz, &
Atm(n)%q,Atm(n)%flagstruct%hydrostatic, &
Atm(n)%pt,Atm(n)%peln,Atm(n)%phis,grav, &
0., 3.e3)
call max_uh(isco,ieco,jsco,jeco,ngc,npzo,zvir, &
sphum,uhmax25,uhmin25,Atm(n)%w,vort,Atm(n)%delz, &
Atm(n)%q,Atm(n)%flagstruct%hydrostatic, &
Atm(n)%pt,Atm(n)%peln,Atm(n)%phis,grav, &
2.e3, 5.e3)
endif
kdtt=kdtt+1
deallocate (vort)
else
print *,'Missing max/min hourly field in diag_table'
print *,'Make sure the following are listed in the diag_table under gfs_dyn:'
print *,'wmaxup,wmaxdn,uhmax03,uhmin03,uhmax25,uhmin25,maxvort01,maxvort02 and maxvorthy1'
call mpp_error(FATAL, 'Missing max hourly fields in diag_table')
stop
endif
endif
end subroutine fv_nggps_tavg
!
subroutine store_data(id, work, Time, nstt, nend)
integer, intent(in) :: id
integer, intent(in) :: nstt, nend
real, intent(in) :: work(isco:ieco,jsco:jeco,nend-nstt+1)
type(time_type), intent(in) :: Time
!
integer k,j,i,kb
logical :: used
!
if( id > 0 ) then
if( use_wrtgridcomp_output ) then
do k=1,nend-nstt+1
do j= jsco,jeco
do i=isco,ieco
kb = k + nstt - 1
buffer_dyn(i,j,kb) = work(i,j,k)
enddo
enddo
enddo
else
used = send_data(id, work, Time)
endif
endif
end subroutine store_data
#ifdef use_WRTCOMP
subroutine fv_dyn_bundle_setup(axes, dyn_bundle, fcst_grid, quilting, rc)
!
!-------------------------------------------------------------
!*** set esmf bundle for dyn output fields
!------------------------------------------------------------
!
use esmf
use diag_data_mod, ONLY: diag_atttype
!
integer, intent(in) :: axes(:)
type(ESMF_FieldBundle),intent(inout) :: dyn_bundle
type(ESMF_Grid),intent(inout) :: fcst_grid
logical,intent(in) :: quilting
integer,intent(out) :: rc
!*** local variables
integer i, j, k, n
integer num_axes, id, axis_length, direction, edges
integer num_attributes, num_field_dyn, axis_typ
character(255) :: units, long_name, cart_name,axis_direct,edgesS
character(128) :: output_name, output_file, output_file1, dynbdl_name, shydrostatic
integer currdate(6), idx1
logical l3Dvector
type(domain1d) :: Domain
type(domainuG) :: DomainU
real,dimension(:),allocatable :: axis_data
type(diag_atttype),dimension(:),allocatable :: attributes
character(2) axis_id
type(ESMF_Field) :: field
!
!jwtest
! integer :: fieldcount
! character(128) :: fld_outfilename
! character(128),dimension(:),allocatable :: fieldnamelist
! type(ESMF_Field),dimension(:),allocatable :: fieldlist
!
!------------------------------------------------------------
! initialize RC
rc = ESMF_SUCCESS
!--- use wrte grid component for output
use_wrtgridcomp_output = quilting
! data type
if(.not. allocated(buffer_dyn))allocate(buffer_dyn(isco:ieco,jsco:jeco,nlevs))
buffer_dyn=0.
num_field_dyn = 0.
!
! set output files
call ESMF_FieldBundleGet(dyn_bundle, name=dynbdl_name,rc=rc)
if (ESMF_LogFoundError(rcToCheck=rc, msg=ESMF_LOGERR_PASSTHRU, &
line=__LINE__, &
file=__FILE__)) &
return ! bail out
idx1 = index(dynbdl_name,'_bilinear')
if(idx1 > 0) then
output_file = dynbdl_name(1:idx1-1)
else
output_file = 'dyn'
endif
!
!------------------------------------------------------------
!*** add attributes to the bundle such as subdomain limtis,
!*** axes, output time, etc
!------------------------------------------------------------
!
!*** add attributes
num_axes = size(axes)
allocate(all_axes(num_axes))
all_axes(1:num_axes) = axes(1:num_axes)
! if(mpp_pe()==mpp_root_pe())print *,'in fv_dyn bundle,num_axes=',num_axes, 'axes=',axes
!
!*** add global attributes in the field bundle:
call ESMF_AttributeAdd(dyn_bundle, convention="NetCDF", purpose="FV3", &
attrList=(/"hydrostatic", &
"ncnsto ", &
"ak ", &
"bk "/), rc=rc)
if (ESMF_LogFoundError(rcToCheck=rc, msg=ESMF_LOGERR_PASSTHRU, &
line=__LINE__, &
file=__FILE__)) &
return ! bail out
if (hydrostatico ) then
shydrostatic = 'hydrostatic'
else
shydrostatic = 'non-hydrostatic'
endif
call ESMF_AttributeSet(dyn_bundle, convention="NetCDF", purpose="FV3", &
name="hydrostatic", value=trim(shydrostatic), rc=rc)
if (ESMF_LogFoundError(rcToCheck=rc, msg=ESMF_LOGERR_PASSTHRU, &
line=__LINE__, &
file=__FILE__)) &
return ! bail out
!
call ESMF_AttributeSet(dyn_bundle, convention="NetCDF", purpose="FV3", &
name="ncnsto", value=ncnsto, rc=rc)
if (ESMF_LogFoundError(rcToCheck=rc, msg=ESMF_LOGERR_PASSTHRU, &
line=__LINE__, &
file=__FILE__)) &
return ! bail out
!
call ESMF_AttributeSet(dyn_bundle, convention="NetCDF", purpose="FV3", &
name="ak", valueList=ak, rc=rc)
! if(mpp_pe()==mpp_root_pe())print *,'in fv_dyn bundle,after add ak, rc=',rc
if (ESMF_LogFoundError(rcToCheck=rc, msg=ESMF_LOGERR_PASSTHRU, &
line=__LINE__, &
file=__FILE__)) &
return ! bail out
!
call ESMF_AttributeSet(dyn_bundle, convention="NetCDF", purpose="FV3", &
name="bk", valueList=bk, rc=rc)
! if(mpp_pe()==mpp_root_pe())print *,'in fv_dyn bundle,after add bk, rc=',rc
if (ESMF_LogFoundError(rcToCheck=rc, msg=ESMF_LOGERR_PASSTHRU, &
line=__LINE__, &
file=__FILE__)) &
return ! bail out
!
!*** get axis names
allocate(axis_name(num_axes))
do id = 1,num_axes
call get_diag_axis_name( axes(id), axis_name(id))
enddo
if( num_axes>2 ) then
allocate(axis_name_vert(num_axes-2))
do id=3,num_axes
axis_name_vert(id-2) = axis_name(id)
enddo
! if(mpp_pe()==mpp_root_pe())print *,'in fv_dyn bundle,axis_name_vert=',axis_name_vert
call ESMF_AttributeAdd(fcst_grid, convention="NetCDF", purpose="FV3", &
attrList=(/"vertical_dim_labels"/), rc=rc)
if (ESMF_LogFoundError(rcToCheck=rc, msg=ESMF_LOGERR_PASSTHRU, &