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DESCRIPTION
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Package: ciber
Title: Inferring causal cellular networks and intrinsic biological effects using
graphical models and optimal transport
Version: 1.0.0
Authors@R:
c(
person("Longchen", "Xu", email = "xlc17@tsinghua.org.cn", role = c("aut", "cre")),
person("Hengyi", "Xu", email = "xhy18006@student.pumc.edu.cn", role = c("aut"),
comment = list(ORCID = "0000-0002-5772-0661")),
person("Zhemeng", "Rao", email = "raozm22@mails.tsinghua.edu.cn", role = c("ctb"))
)
Description: Using topology-optimized Bayesian networks and structural causal model
to infer causal cellular networks and identify cell-fate determining genes.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Imports:Seurat, bnlearn, corpcor, doParallel, dplyr, foreach,
graph, igraph, infotheo, magrittr, MASS, Matrix, matrixStats,
parallel, Rgraphviz, rlang, statmod, tibble, tidyr, tidyselect, space
LinkingTo: Rcpp
Depends: R (>= 3.5.0)
LazyData: true
NeedsCompilation: no
Packaged: 2024-03-20 14:02:20 UTC; lanrotate
Author: Longchen Xu [aut, cre], Hengyi Xu [aut] (<https://orcid.org/0000-0002-5772-0661>), Zhemeng Rao [ctb]
Maintainer: Longchen Xu <xlc17@tsinghua.org.cn>