don't add spaces in final name

Joon-Klaps · Joon-Klaps · commit 2eb9fdc1f5ff · 2024-12-05T11:17:10.000Z
diff --git a/main.nf b/main.nf
@@ -96,7 +96,7 @@ workflow {
 def getGlobalPrefix(workflow,params) {
     def date_stamp = new java.util.Date().format( 'yyyyMMdd')
     if (params.prefix) {
-        return "${params.prefix}_${date_stamp}_${workflow.manifest.version}_${workflow.runName}"
+        return "${params.prefix}_${date_stamp}_${workflow.manifest.version}_${workflow.runName}".replaceAll("\\s+", "_")
     }
     return null
 }

Original file line number	Diff line number	Diff line change
`@@ -96,7 +96,7 @@ workflow {`
`96`	`96`	`def getGlobalPrefix(workflow,params) {`
`97`	`97`	`def date_stamp = new java.util.Date().format( 'yyyyMMdd')`
`98`	`98`	`if (params.prefix) {`
`99`		`- return "${params.prefix}_${date_stamp}_${workflow.manifest.version}_${workflow.runName}"`
	`99`	`+ return "${params.prefix}_${date_stamp}_${workflow.manifest.version}_${workflow.runName}".replaceAll("\\s+", "_")`
`100`	`100`	`}`
`101`	`101`	`return null`
`102`	`102`	`}`