pylossless_0.2.json

{
    "name": "pyLossless",
    "author": "Scott Huberty and Tyler Collins <https://github.com/lina-usc/pylossless>",
    "description": "Run the pyLossless pipeline on a BIDS subject file.",
    "tool-version": "0.2",
    "schema-version": "0.5",
    "command-line": "pylossless [BDF_INPUT] [SUBJECT_ID] [OUTPUT_PATH]",
    "container-image": {
        "image": "tk11br/pylossless-cbrain:0.2",
        "index": "docker://",
        "type": "singularity"
    },
    "inputs": [
        {
            "id": "bdf_input",
            "name": "Single BDF file",
            "optional": false,
            "type": "File",
            "description": "Input BDF file to the pylossless pipeline.",
            "value-key": "[BDF_INPUT]"
        },
        {
            "id": "subject_id",
            "name": "Subject ID",
            "optional": false,
            "type": "String",
            "description": "Subject ID to assign to source file.",
            "value-key": "[SUBJECT_ID]"
        },
        {
            "id": "output_path",
            "name": "Output Path",
            "optional": false,
            "type": "String",
            "description": "Output path to begin writing tool results.",
            "value-key": "[OUTPUT_PATH]"
        }
    ],
    "output-files": [
        {
            "id": "output_directory",
            "name": "Output Directory",
            "optional": true,
            "description": "Output directory",
            "path-template": "[OUTPUT_PATH]/derivatives/pylossless"
        }
    ],
    "suggested-resources": {
        "walltime-estimate": 7200,
        "ram": 16
    },
    "custom": {
        "cbrain:author": "Tyler Collins <collins.tyler.k@gmail.com>",
        "cbrain:readonly-input-files": true,
        "cbrain:integrator_modules": {
            "BoutiquesInputValueFixer": {
                "output_path": "cbrain_py_out"
            }
        }
    },
    "tags": {
        "domain": [
            "neuroinformatics",
            "eeg",
            "eegnet"
        ]
    },
    "doi": "10.5281/zenodo.14008350"
}